| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2173 |
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| Symbol | |
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| ID | 6289014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2285704 |
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| End bp | 2286417 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642625744 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001899739 |
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| Protein GI | 187929252 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.129059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0371904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGA AGACCTTGCA GGATCAGTCC GTGGTGGTGT TGGGCGGTAC GGCCGGTATT
GGCCAGGCGG TGGCACGCGC GGCTGTAGCC GAAGGGGCGC GCGTGACGGT GCTGGGGCGC
TCGGCCAAAG CGGCGGATGG CGCGCACGGC ATTGCCGTCG ACGCGAACGA CACGGCGTCG
CTCGCCAGCG CGCTGGCGCA GGCAGCCCAG TTGTCGCCCA GCGGCAAGAT CGACCATCTC
GTCATCACCA TCGGCTCGCG TACGAGCCCA CCGCCGTTTG CCGCGCTGCA ACGTGCTGAC
CTGGAACAGG CGTTTGGCAC CAAGTTCTTT GCCGCCTTGA TGGCAGTGCA GGCCGCATTG
CCACATCTGG CGGAACGCGC ATCGATTACG CTCACCTCTG GCCTGCTTTC ACGCAAGGCG
ACAGCAACCG GCCTGCTGCG TGGCTCGATC AACGCGGCGG TGGAAGCTGC TGGCAAGAAC
CTGGCGAAGG AACTGGCACC GCGTCGTGTC AACGTGATCA GCCCCGGTGT GGTGGATACG
GAAGTATGGG GTGCGCCGGC AGATCGGCAG GCCATGCTTG CGCGCATCGG CAGCGGCCTG
CCGGTCGGCC GCGTCGGCAC GCCGGAAGAC CTCGCCCAAG GCTACCTGCT GGCCATGACC
AACGGTTTCA TGACCGGCGC CATCATCGAC ATTGAAGGAG GCGGTTTGCT ATGA
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| Protein sequence | MTSKTLQDQS VVVLGGTAGI GQAVARAAVA EGARVTVLGR SAKAADGAHG IAVDANDTAS
LASALAQAAQ LSPSGKIDHL VITIGSRTSP PPFAALQRAD LEQAFGTKFF AALMAVQAAL
PHLAERASIT LTSGLLSRKA TATGLLRGSI NAAVEAAGKN LAKELAPRRV NVISPGVVDT
EVWGAPADRQ AMLARIGSGL PVGRVGTPED LAQGYLLAMT NGFMTGAIID IEGGGLL
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