Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06495 |
Symbol | |
ID | 5556930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1647954 |
End bp | 1648622 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640910968 |
Product | oxidoreductase |
Protein accession | YP_001448613 |
Protein GI | 156977707 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG AAAAAACTGT TTACGTCGTA CTAGGTGGCA CATCAGGTAT TGGTGCTGAA CTTAGCCAAC AACTTGCAAA CGACAATTCG ATTATACACG TAGCAAGCCG CAAAACAGGG CTAGACATCA GCGATGAACA ATCGGTTTAC CACTACTTCG AAACCATTGG TGCTTTTGAC CACCTGATCG TCACAGCAGG TTCTTATGCT CCGGCAGGCA AAGTGGTGGA CGTGGAAGTT TCCCAAGCAA AATACGCTTT TGATACCAAG TTTTGGGGCG CAATCAACGC GGCAAAACAT GGCGCACGCT ACATCAAGAA AGACGGCTCA ATTACGCTAA CGTCTGGCAT GTTATCGCGC AAAGTTGTTG CTAACACCTA CGTCAAAACT GCCATCAACG CGGCCATTGA AGCGACCACG AAAGTACTGG CGAAAGAATT GGCTCCGATC AGAGTGAATG CGGTCAGCCC TGGTTTGACT AAAACTGAGG CGTATCAAGG CATGAGCGAA GACGACAGAA ATGCTATGTA CCAACGCACA CAAAATAGCT TACCTGTGGG CAAAGTTGGC GAAGCCAGTG ACGTTGCAAA AGCTTACCGA CTTCTGATTG AAAACAGCTA CATGACTGGC GCCGTGATTG ATGTTGATGG TGGCGCACTG CTTGGCTAA
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Protein sequence | MKTEKTVYVV LGGTSGIGAE LSQQLANDNS IIHVASRKTG LDISDEQSVY HYFETIGAFD HLIVTAGSYA PAGKVVDVEV SQAKYAFDTK FWGAINAAKH GARYIKKDGS ITLTSGMLSR KVVANTYVKT AINAAIEATT KVLAKELAPI RVNAVSPGLT KTEAYQGMSE DDRNAMYQRT QNSLPVGKVG EASDVAKAYR LLIENSYMTG AVIDVDGGAL LG
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