| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1079 |
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| Symbol | |
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| ID | 8332414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1222074 |
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| End bp | 1222787 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954227 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003111846 |
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| Protein GI | 256390282 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.236839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT CACTGCGGGA TCGGACCGTC GTCGTCATCG GCAGATCGAG CGGCATCGCC
CGCGCGATCG CGGATTCGGC GGTGTCGGCC GGCGCGCGGG TCGTCGTCGC CGGACGCAAT
CCCGAGGCGC TCGCCGACGC TTACGAGGGC AAGCTCCGCG CCGAGCGCGT CGACGTCACC
GATGACGCGT CGATCGCGAG CCTTGCCGCC ACGCTGGGAC CCGTCGACCA TCTCGTGAGC
ACCGCCTCGG CGCGTGCTCG CGGCGTCCTG GGCGACCTCG AGCGCGCCGA CGTCCTGAAC
TCGCTGAACA CCAAGGTCCT CGGGCCGCTG ATGCTCGCCA AGCACTTCGC GCCGCAGATC
GCCGAGGACG GCTCCTTCAC GCTGTTCTCC GGCGTCGCGG CGTTCAAGCC GGCGGTCGGC
TACCTCGGCG TCGCGATCAC CAACGGCGCG GCGGACTTCC TCACGCGCTG CCTCGCGTTG
GAGCTGGCGC CGATCCGGGT CAACGCGATC GCACCCGGCG TGATCGACAC CGGCGCTTGG
GACGCGATGG GGGAGGAGGG CAAGCAGGCG TACTTCGACC ACTTCCGCAC CCACAATCCG
GCGCGGCGGA TCGGCACCTC GCAGGACGTC GCCGACGCGG TCCTGTTCGC GATGACCAAC
CCCTTCCTCA CCGGCGTTAC GCTGCGCGTC GACGGCGGCG AGCCGCTGAC CTGA
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| Protein sequence | MAESLRDRTV VVIGRSSGIA RAIADSAVSA GARVVVAGRN PEALADAYEG KLRAERVDVT
DDASIASLAA TLGPVDHLVS TASARARGVL GDLERADVLN SLNTKVLGPL MLAKHFAPQI
AEDGSFTLFS GVAAFKPAVG YLGVAITNGA ADFLTRCLAL ELAPIRVNAI APGVIDTGAW
DAMGEEGKQA YFDHFRTHNP ARRIGTSQDV ADAVLFAMTN PFLTGVTLRV DGGEPLT
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