| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0052 |
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| Symbol | |
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| ID | 5668478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 65379 |
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| End bp | 66158 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641238981 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001504426 |
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| Protein GI | 158311918 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTTC ATTTGAGCGG TAAGGTCGCG CTCGTCACTG GTGGTTCCCG CGGCATCGGC
CGGGCGATCG TGTCCCGGTT GGCGGCCGAG GGTTGCCGGG TCGGGATCTG CGGACGGGAC
TCCGACGCCT TGGTCCAGGC CGCAGCGAGT CTCGACCTGG CCGAGTCGGA CGTCTTCAGC
CTGACGGCCG ACGTGACCAG GCCTGGCGAT GTAGAACGGT TCGTCGAGGG GGCGGCCGAG
TACTTCGGGG GCGTTGACCT GCTGGTCGCG AACGTCGGCG GCACCGTCGG AGGGGATCTT
CTCGACTCCA CCCCTGAGGA CTGGGCGCAG ACGTTCGAGC TCAACGCCGG CCACGCCGTC
CGGGCGATCC GCAGCGCGGT CCCGCATATG AAGAAGAACG GCGGCGGGTC GGTCGTCATC
GTCTCGTCGA TCTCGGCGTC GAAGCCGTCG CCGCGGGCGC AGTACGGGGC GGCCAAGGTC
GCGGAGATCT ACCTGGCGTC GGCCTTCGCC CGGGAGTTGG GGCCGTTCAA CGTGCGGGTC
AACGCGGTGA GCCCCGGGTC GATCCTCTTC CCCGGGGGCG GCTGGGAGAA CTACGCCCGC
CAGCATCCGG AGGACTTCGA GACGTTCGTG CAGCGGGACT TCCCCGCGCA CAGGCTGGGC
ACCGCCGAGG AGGTCGCGGA CGTGGTGACC TTCCTGCTGT CCGACCGGGC TAGCTGGGTG
AACGGAGCCG ACATCGCCGT CGACGGCGCC CAGGGCCGGC CGAGCGCCCG CGGCTACTGA
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| Protein sequence | MDLHLSGKVA LVTGGSRGIG RAIVSRLAAE GCRVGICGRD SDALVQAAAS LDLAESDVFS
LTADVTRPGD VERFVEGAAE YFGGVDLLVA NVGGTVGGDL LDSTPEDWAQ TFELNAGHAV
RAIRSAVPHM KKNGGGSVVI VSSISASKPS PRAQYGAAKV AEIYLASAFA RELGPFNVRV
NAVSPGSILF PGGGWENYAR QHPEDFETFV QRDFPAHRLG TAEEVADVVT FLLSDRASWV
NGADIAVDGA QGRPSARGY
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