Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1548 |
Symbol | |
ID | 4680374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1522766 |
End bp | 1523488 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639845815 |
Product | short chain dehydrogenase |
Protein accession | YP_992874 |
Protein GI | 121599202 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCTT CTTTCAACGA TCAGCGCGTC CTCGTCATCG GCGGCAGTTC CGGGATCGGC GCCGCGGCCG CCCACGCGTT CGCCGTGCTG GACGCCGACG TGACGATCGC ATCGCGCGAC GCGAACAAGC TCGCGGGCGC CGCACGGGCG ATCGACGGCC CGCGCCCGGT TCGGCAAGCG GTGCTCGATA CGACGGATGC GCCCGCGGTC GACGCCTTCT TCGCCGAGGC CGGCCCGTTC GACCACGTCG TCATGTCGGC CGCGCACACG CCCGGCGGGC CCGTGCGCAA GCTGCCGCTC GCCGACGCGC AGGCGGCGAT GAACAGCAAG TTCTGGGGCG CATACCGCGT CGCGCGCGCG GCGCGCATCG CGCCGGGCGG GTCGCTCACG TTCGTGTCCG GCTTCCTGAG CGTGCGGCCG AGCGCGAGCG CGGTGCTGCA AGGCGCGATC AACGCGGCGC TCGAGGCGCT TGCGCGCGGG CTCGCTCTCG AGCTCGCGCC GGTGCGCGTG AACACCGTGT CGCCGGGGCT CGTCGCGACG CCGCTGTGGT CGAAGCTCGA CGACGCGGCG CGCGAAGCGA TGTACGCGTC GGCGGCCGCG CGGCTGCCCG CGCGGCGCGT CGGGCAGCCC GAGGACGTCG CGAACGCGAT CGTCTACCTC GCGGCGACGC GTTATGCGAC GGGGTCGACC GTGCTCGTGG ACGGCGGCGG CGCGATCGCG TGA
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Protein sequence | MQASFNDQRV LVIGGSSGIG AAAAHAFAVL DADVTIASRD ANKLAGAARA IDGPRPVRQA VLDTTDAPAV DAFFAEAGPF DHVVMSAAHT PGGPVRKLPL ADAQAAMNSK FWGAYRVARA ARIAPGGSLT FVSGFLSVRP SASAVLQGAI NAALEALARG LALELAPVRV NTVSPGLVAT PLWSKLDDAA REAMYASAAA RLPARRVGQP EDVANAIVYL AATRYATGST VLVDGGGAIA
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