Gene M446_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_3511 
Symbol 
ID6131171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp3917558 
End bp3918271 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content76% 
IMG OID641643680 
Productshort chain dehydrogenase 
Protein accessionYP_001770328 
Protein GI170741673 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT TGAAGGACCA GCGCTTCCTC GTTCTCGGCG GAAGTTCCGG GATCGGGCTG 
GCCACGGCGC GCGCCGCCGC CGGGGCGGGA GCGGCCGTGA CGGTGGCCTC GCGCTCCCGG
GACAAGCTCG ATGCGGCCCT CGCGGCGATC GGCGGCACGG CGCGCGCCGT CGTGCTCGAC
ACGACCGACA ACGGCGCCGT CGAGCGGTTC TTCGCCGATG AGAGTCCCTG GGACCACGTC
GCGATCTCCG CCGCCGAGAC GGCCCGGGGC CCCGTCCGGG GCCTCGGGCT GGACGCGGCC
CGGGCCGCGA TGGAGAGCAA GTTCTGGGGC GCCTACCAGG TCGCCCGGGC CGCGCGGATC
GGGCCGGGCG GCTCGCTGAC CTTCGTGTCG GGCTACATGA GCGAGCGGCC CCTGGCCACC
GCGGTCCTGC AGGGGGCGAT CAACGCCGCC CTCGAAGGGC TGGCACGGGG CCTCGCCCTC
GAACTCGCCC CGGTGCGGGT CAACACGGTG TCGCCCGGCC TGATCGAGAC GCCGCTCTGG
TCGCGCATGG CGGAGGCGGA CCGCGCCGCC ATGTTCGCGA ATGCGGCGGA GCGGCTGCCG
GCGCGCCGCG TCGGCCGTCC CGAGGACGTC GCCAACGCGG TCCTGTTCCT CGCCGCCACG
CCCTTCGCGA CGGGCTCGAC CCTCCGCCTC GACGGGGGCG CCGCCATCGC GTGA
 
Protein sequence
MQQLKDQRFL VLGGSSGIGL ATARAAAGAG AAVTVASRSR DKLDAALAAI GGTARAVVLD 
TTDNGAVERF FADESPWDHV AISAAETARG PVRGLGLDAA RAAMESKFWG AYQVARAARI
GPGGSLTFVS GYMSERPLAT AVLQGAINAA LEGLARGLAL ELAPVRVNTV SPGLIETPLW
SRMAEADRAA MFANAAERLP ARRVGRPEDV ANAVLFLAAT PFATGSTLRL DGGAAIA