| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1649 |
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| Symbol | |
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| ID | 6064845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1827827 |
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| End bp | 1828579 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641601063 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001724633 |
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| Protein GI | 170019679 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000150236 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAATT TTGCAGGTAA AGTGGTTTTA GTTACCGGAG GTGCTCACGG TATTGGAAAA
GGGATAGCTA AACAATTTGC TGATCGTGGT GCACATACTG TTATTGTTGA CTATAACGAA
GAGAACGGCA AGGCCACTGC AGCAGAGTTA ACTTTTGGCG ATGTTAAATC GTTGTTTATT
AAAACAGATG TCTCCGATCC ACAGGCATTA GTGGATGTTC GGGAAAAGGT ATTTGCTACC
TTTGGTCGCA TTGATGTGTT GATATTAAAT GCCGGTGTGG CATTTGCCAA TAAAGTTAAC
AATATTTCTT TTGAGGAATG GAATAAGACT ATCGCAATTA ACTTATCAGG ATTATTTAAT
ACCGTTAAGG CGTTTTATGA TGATTTCCTG ACAAATAAGG GATCTATTGT TTATATCTCA
TCGGGATCAG CGCTTTCGGG GACTGGGGGC GGTGTCAGTT ATCCTGCCAG TAAAGCGGGA
GGCGAAGGAT TGATTCGTGG GCTGGCAAAA GAGTTAGGAC CAAAAGGCGT CAATGTCAAT
GCGATTGCTC CCCGCTTAAT AGACACCGGA GAGATGATGC GGGTCAACTA TCCAACACAA
GCCGATTTAG ACGCTGTCCT GGAAAAAATA CCCGTCCGTC GTCTGGGGAC TATCGATGAT
GTGGCTAACC TGGCAATATT TTTGGCAGAT AAAGATAACT CTTATATTCA GGGACAAACC
ATTTTAATGG ATGGTGGCCG GACTATTGCT TAA
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| Protein sequence | MSNFAGKVVL VTGGAHGIGK GIAKQFADRG AHTVIVDYNE ENGKATAAEL TFGDVKSLFI
KTDVSDPQAL VDVREKVFAT FGRIDVLILN AGVAFANKVN NISFEEWNKT IAINLSGLFN
TVKAFYDDFL TNKGSIVYIS SGSALSGTGG GVSYPASKAG GEGLIRGLAK ELGPKGVNVN
AIAPRLIDTG EMMRVNYPTQ ADLDAVLEKI PVRRLGTIDD VANLAIFLAD KDNSYIQGQT
ILMDGGRTIA
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