| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1759 |
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| Symbol | |
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| ID | 8357909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2134254 |
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| End bp | 2135006 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963946 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003121456 |
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| Protein GI | 256420803 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.880714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA AATTAAAGAA TAAGGTAGCG GTAATTACCG GAGGAAACAG CGGCATCGGT
CTGGGTACAG CAAAGTTATT TGCACTGGAG GGCGCTAAAG TAGTGATCAC AGGCCGTGAT
ACGGAAACGA TCAGCAGTGC AGTAGCTGAA ATAGGAAATG ACGCAACAGG TTTTGTTAGC
GACGTTAGTG ATATGAGCAG TTTCGCCCCA CTCTTCCAAC AGATAGGTGC TACACAGGGG
AAAATAGATG TATTGGTAGT AAATGCAGGT ACGATGCTGA CAGCGCCAAT AGCTGAGATG
ACAGAAGAGA TATTCGACAA AGTAACGGAT ATCAATTATA AAGGGGCATT CTTCACCATA
AAACATGCCT TGCCATATAT GAATGAGGGC GCTTCTATTG TTATTACCAC GTCTACGGTA
TCTGATAAAG CCTTCGTAGA AGGTAGCGCA TATGTCGCTT CCAAAGCTGC AAAAAGAGCG
CTGGTGAGAG TATTGGCAGC GGAACTGGCT GCCCGGAAAA TAAGGGTGAA TGCATTAGCG
CCGGGATTTA TCGACACGCC TTTTTTAGCC AAGTCTGGTT ATACCCAGGA GTATGCAAAT
TCGGTACGCG GCTTTTTTGA AGGTGCAGTA GCGATGAAAC GGGCTGGTAC TGTAGAAGAA
ATGGCCAAAG GATTTTTGTT CCTTGCGTCT GATGACTCGT CTTATATGAC AGGAGGGGAG
TTGCTGATGG ATGGTGGTTA CAGGGATCTG TAA
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| Protein sequence | MSQKLKNKVA VITGGNSGIG LGTAKLFALE GAKVVITGRD TETISSAVAE IGNDATGFVS
DVSDMSSFAP LFQQIGATQG KIDVLVVNAG TMLTAPIAEM TEEIFDKVTD INYKGAFFTI
KHALPYMNEG ASIVITTSTV SDKAFVEGSA YVASKAAKRA LVRVLAAELA ARKIRVNALA
PGFIDTPFLA KSGYTQEYAN SVRGFFEGAV AMKRAGTVEE MAKGFLFLAS DDSSYMTGGE
LLMDGGYRDL
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