Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1849 |
Symbol | |
ID | 8019505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1968187 |
End bp | 1968900 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830632 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002981802 |
Protein GI | 241663442 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00951861 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTCGA AGACCTTGCA GGATCAGTCC GTGGTGGTGT TGGGCGGTAC GGCCGGTATT GGTCAGGCGG TGGCACGCGC GGCTGTAGCC GAAGGGGCGC GCGTGACGGT GCTGGGGCGC TCGGCCCAAG CGGCGGATGG CGCGCACGGC ATTGCCGTCG ACGCGAACGA CACGGCGTCG CTCGCCAGCG CGCTGGCGCA GGCAGCCCAG TTGTCGCCCA GCGGCAAGAT CGACCATCTC GTCATCACCA TCGGCTCGCG TACGAGCCCA CCGCCGTTTG CCGCGCTGCA ACGTGCTGAC CTGGAACAGG CGTTTGGCAC CAAGTTCTTT GCCGCCTTGA TGGCAGTGCA GGCCGCATTG CCACATCTGG CGGAACGCGC ATCGATTACG CTCACCTCTG GCCTGCTTTC ACGCAAGGCG ACAGCAACCG GCCTGCTGCG TGGCTCGATC AACGCGGCGG TGGAAGCTGC TGGCAAGAAC CTGGCGAAGG AACTGGCACC GCGCCGTGTC AACGTGATCA GCCCCGGTGT GGTGGATACG GAAGTATGGG GTGCGCCGGC AGATCGGCAG GCCATGCTCG CGCGCATCGG CAGCGGCCTG CCGGTCGGCC GTGTCGGCAC GCCGGAAGAC CTCGCCCAAG GCTACCTGCT GGCCATGACC AACGGTTTCA TGACCGGCGC CATCATCGAC ATTGAAGGAG GCGGTTTGCT ATGA
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Protein sequence | MTSKTLQDQS VVVLGGTAGI GQAVARAAVA EGARVTVLGR SAQAADGAHG IAVDANDTAS LASALAQAAQ LSPSGKIDHL VITIGSRTSP PPFAALQRAD LEQAFGTKFF AALMAVQAAL PHLAERASIT LTSGLLSRKA TATGLLRGSI NAAVEAAGKN LAKELAPRRV NVISPGVVDT EVWGAPADRQ AMLARIGSGL PVGRVGTPED LAQGYLLAMT NGFMTGAIID IEGGGLL
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