Gene Anae109_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3655 
Symbol 
ID5377906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4267040 
End bp4267819 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content73% 
IMG OID640845176 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001380819 
Protein GI153006494 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.429144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGGC TCCGAAGGAA GATCGGCCTG GCGCGCGCCG GAGGCGGGGG AGGGGGAGCT 
CACGTGAGCG AGCTGGCAGG GCAGACGGTC GCGATCGTGG GGGCGAGCTC CGGCATCGGG
CTCGCCACCG CGAAGGCGGC GGCAGCGCAG GGCGCCACCA CGGTCCTGCT CAGCCGGTCG
CAGGCGCGGC TGGACGAGGC CGCGAGGGCG GTCCCTGGAA CGACACGCGC AGTCGCGATG
GACATGCTCG ACGAGGCCGC GGTGGGCCGC GCGATGTCCG CCGTCGGCGC CATCGACCAC
CTGGTCCTCA CCGCGGTGGG CGACGAATAC GAGTTCTCGG GGCCGATCGC CGAGCTCACC
GCCGAGCAGC TCGAGCGCAG CCTGGACAAG CTCAGAGGCT ACGTGACCGT GACCCGTGCG
GCCGTGCCCC GGATCCGCGA GCGCGGGTCC ATCACCCTGC TGTCGGGCGC CGGCGCGGCG
AGGCCGCCGA AGGGGACCTC GTTCCCGGCC GCCGCGAACG GGGCGATCGT GAGCTTCGGA
AGGGCGCTCG CCCTGGAGCT GGCGCCGCTG CGCGTGAACG TGGTGATGCC GGGCCTGGTC
GACACGCCTC TTCACGGAGA GAAGCGAGCG GCGCTCGCCG CATGGGCCGA GTCGCCAGCG
CTGCCGGCGC GCAGGTTCGG ACAGGCGGAC GACATCGCGC ACGCGATCGT GTTCCTCATG
ACGAACCGCT ACGTGACGGG GCACACGCTC GTCGTCGACG GCGGCCTCCT CGCCGGCTAG
 
Protein sequence
MERLRRKIGL ARAGGGGGGA HVSELAGQTV AIVGASSGIG LATAKAAAAQ GATTVLLSRS 
QARLDEAARA VPGTTRAVAM DMLDEAAVGR AMSAVGAIDH LVLTAVGDEY EFSGPIAELT
AEQLERSLDK LRGYVTVTRA AVPRIRERGS ITLLSGAGAA RPPKGTSFPA AANGAIVSFG
RALALELAPL RVNVVMPGLV DTPLHGEKRA ALAAWAESPA LPARRFGQAD DIAHAIVFLM
TNRYVTGHTL VVDGGLLAG