| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2231 |
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| Symbol | |
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| ID | 5323092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2311887 |
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| End bp | 2312648 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791169 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001327898 |
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| Protein GI | 150397431 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAATT ACCAGGGAAA GAAGGCAATC ATTGTAGGCG GCACGCATGG CATGGGCCTC
GCGACGGTCC GCCGCCTCGT GGAAGGGGGT GCCGAGGTAC TGCTGACCGG GCGCAGCGAG
AGCAATATCG CCCGCATCAG GGAAGAGTTT GGTCCGCGCG TGCATGCGCT ATCCTCCGAC
ATAGCCCACC TCAACGACAT CGCCATTCTC GGTGCCGCCG CCGGTCAGAA GTTGGGAGCG
ATCGATCTCC TGCATATCAA TGCCGGCATT TCCGAGCTGG AGCCGTTCGA TCAGGTGAGC
GAGGCCTCCT ATGACCGCCA GTTCTCGGTC AACACCAAGG GCGCCTTTTT CACCGTGCAG
CGGCTGGCGC CGCTGATCCG CGAAGGCGGC TCTATCGTCT TCACCTCCTC CGTTGCCGAC
GAAGGCGGGC ATCAGGGCAT GAGCGTCTAT AGCGCGAGCA AGGCGGCACT CGTCTCCTTC
GCTTCCGTGC TCGCGGCAGA ACTGCTGCCG CGTGGTATCC GCGTCAACAG CGTCAGCCCG
GGCTTCATCG ACACCCCGAC CAAAGGTGCT GCGGGCCTAA CCGAAGCCCA ACGGGCCGAG
TTCAAGGCCC TCGGCGACGC CATCACGCCG ATGAGGCGCA ACGGCACCGC CGATGAAGTG
GCGCGCGCCG TCCTCTTCCT TGCCTTCGAG GCCACCTTCA CCACCGGCGC GAAGCTCGCC
GTCGACGGCG GCCTCGGCCA GAAGCTCTCG ACCGCCGCCT GA
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| Protein sequence | MGNYQGKKAI IVGGTHGMGL ATVRRLVEGG AEVLLTGRSE SNIARIREEF GPRVHALSSD
IAHLNDIAIL GAAAGQKLGA IDLLHINAGI SELEPFDQVS EASYDRQFSV NTKGAFFTVQ
RLAPLIREGG SIVFTSSVAD EGGHQGMSVY SASKAALVSF ASVLAAELLP RGIRVNSVSP
GFIDTPTKGA AGLTEAQRAE FKALGDAITP MRRNGTADEV ARAVLFLAFE ATFTTGAKLA
VDGGLGQKLS TAA
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