More than 300 homologs were found in PanDaTox collection
for query gene Swit_4628 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_4628  methyl-accepting chemotaxis sensory transducer  100 
 
 
454 aa  893    Sphingomonas wittichii RW1  Bacteria  normal  0.306031  normal 
 
 
-
 
NC_009511  Swit_1313  methyl-accepting chemotaxis sensory transducer  63.69 
 
 
419 aa  323  3e-87  Sphingomonas wittichii RW1  Bacteria  normal  0.0819419  normal 
 
 
-
 
NC_008048  Sala_0556  methyl-accepting chemotaxis sensory transducer  53.14 
 
 
450 aa  313  3.9999999999999997e-84  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.17673  normal  0.122015 
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  37.74 
 
 
736 aa  140  6e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
563 aa  137  4e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  39.66 
 
 
714 aa  135  9.999999999999999e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  38.8 
 
 
561 aa  134  3e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  40.94 
 
 
674 aa  133  6.999999999999999e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  44.51 
 
 
561 aa  132  9e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_011894  Mnod_5958  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
445 aa  132  1.0000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.28154  n/a   
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
562 aa  132  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
566 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
565 aa  131  2.0000000000000002e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.51 
 
 
716 aa  130  4.0000000000000003e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
561 aa  130  6e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0713  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
685 aa  130  6e-29  Maricaulis maris MCS10  Bacteria  normal  normal  0.862704 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  40.53 
 
 
561 aa  129  8.000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
673 aa  129  9.000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_010172  Mext_4068  chemotaxis sensory transducer  42.79 
 
 
591 aa  129  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.269414  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
566 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  36.21 
 
 
565 aa  128  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  44.5 
 
 
561 aa  128  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011757  Mchl_4435  methyl-accepting chemotaxis sensory transducer  42.79 
 
 
561 aa  128  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0198477  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  39 
 
 
675 aa  128  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
449 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
561 aa  128  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_009485  BBta_0533  methyl-accepting chemotaxis protein (MCP)  36.64 
 
 
712 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.595703 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  39.37 
 
 
568 aa  127  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
562 aa  127  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
694 aa  127  4.0000000000000003e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  37.89 
 
 
561 aa  127  5e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
567 aa  127  5e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
561 aa  127  6e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  37.05 
 
 
656 aa  127  6e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  42.27 
 
 
558 aa  126  7e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
561 aa  126  8.000000000000001e-28  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
667 aa  126  9e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_010725  Mpop_2242  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
562 aa  125  1e-27  Methylobacterium populi BJ001  Bacteria  normal  0.0448901  normal  0.213644 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
558 aa  125  1e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
563 aa  125  1e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
561 aa  125  1e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2471  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
718 aa  125  1e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0242034  normal 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  37.25 
 
 
661 aa  125  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
566 aa  125  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
712 aa  125  2e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  39.18 
 
 
688 aa  124  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  43.3 
 
 
563 aa  124  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  38.64 
 
 
563 aa  124  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
561 aa  124  3e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  37.45 
 
 
568 aa  124  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
698 aa  124  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
561 aa  124  3e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  32.37 
 
 
561 aa  124  3e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_010511  M446_1024  methyl-accepting chemotaxis sensory transducer  41.41 
 
 
562 aa  124  4e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
656 aa  124  4e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
731 aa  124  4e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  38.56 
 
 
563 aa  124  4e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  43.93 
 
 
559 aa  124  5e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  38.36 
 
 
565 aa  124  5e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0198  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.4 
 
 
494 aa  124  5e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.272147  normal  0.663186 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
563 aa  123  6e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
560 aa  123  7e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  36.7 
 
 
656 aa  123  7e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
675 aa  123  8e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_011757  Mchl_4818  methyl-accepting chemotaxis sensory transducer  45.41 
 
 
252 aa  123  8e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
428 aa  122  9e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
563 aa  123  9e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  42.65 
 
 
438 aa  122  9.999999999999999e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
730 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
641 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  40.68 
 
 
563 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
672 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
562 aa  122  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
560 aa  121  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_010514  Mrad2831_6358  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.08 
 
 
490 aa  122  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  36.7 
 
 
565 aa  121  3e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
741 aa  121  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
572 aa  121  3e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  38.84 
 
 
671 aa  120  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0496  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
838 aa  120  3.9999999999999996e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.421547 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  42.79 
 
 
730 aa  120  3.9999999999999996e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_010510  Mrad2831_5878  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
562 aa  120  3.9999999999999996e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.338132 
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  43.46 
 
 
579 aa  120  3.9999999999999996e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
562 aa  120  4.9999999999999996e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
563 aa  120  4.9999999999999996e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  47.46 
 
 
444 aa  120  4.9999999999999996e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0752  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
716 aa  120  6e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.713683  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  38.96 
 
 
691 aa  120  6e-26  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  40.25 
 
 
563 aa  120  6e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
681 aa  120  6e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  37.55 
 
 
542 aa  120  6e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  37.83 
 
 
573 aa  120  7e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  43 
 
 
602 aa  120  7e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4653  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
699 aa  119  7.999999999999999e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.357243 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  39.91 
 
 
563 aa  119  7.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  40.09 
 
 
670 aa  119  9e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  38.58 
 
 
565 aa  119  9e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_010505  Mrad2831_3533  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
560 aa  119  9.999999999999999e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.515868  normal 
 
 
-
 
NC_010172  Mext_0809  chemotaxis sensory transducer  37.82 
 
 
717 aa  119  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4561  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
711 aa  119  9.999999999999999e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
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