| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0556 |
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| Symbol | |
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| ID | 4081446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 570490 |
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| End bp | 571842 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008914 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_615610 |
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| Protein GI | 103486049 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.17673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.122015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAGG ACAATCCGAT TCACAAGCAA CAGATCGATC CGATTTTGAT GTCGGAACGC
TTTCCTTATT ATGATCTCGA CGGACGGCTG GCGGCCAACG CCGCGGAAAT CCACGCGATC
ATCGCGGGCC GCGAAGAGGC CGTCGCGCGC GCCTATTGGG ATGCCTTCAA CGCGCTGCCG
AACATGGATC GCCGCGTCGA AGGCGAGCTT TACGACAGCT ATGTCCGCGG CAGTGCGCGC
CACGCGTCGG TCAAATATGC CGACGCCGCC GGACAGGAAG CCGCGACGAT CGCCTGCCAG
AACACGCATA TGGCGCGGCG CGTCAAAATG CCGCTCGCAT CGGTCATGTC GTGCATCGCC
GAAAGCCAGC GGCTGACAAT CGAATATGTC GTCGAAGCAT GTATCGGCGA TGCGGAGCGG
CTGGCACGGC TGACGAGCGC GATCAACCGG CTCGCGCTGC TCGAGTTCGA CATCATGCAG
CGCTATGCGA GCAAGCTCGA TCGCGCGGTG ATTTCCAGCG AACGACAGAC GCTGGCACGC
GATTTCGACC GCTCGATCGC ATCGCTGGTG CAGGATACCG AGGGCGTACG CGAGCGGCTT
GCCAGGCAGG CCGCCTCGGC CGACCAGGCC GCGAAAGGCA TGATCGCCAA GACCAGCGAA
GTCGCCGCGG CGTCCGAACA ATCGGCGATG GCGATGCGCG AAGCCGCCTC CACCGCCGCG
GGCCTGATCC GCGCGATCGA GGATGCGCGC AGCGAAGTCG AAGCTTCGGC CAGCGTGGCG
ACGCGCGCGT CCGAACAGGC GGGCGAAGCG GTCGCCATGT CGGAAGCCTT GTCGCATCAC
GCCGAATCGA TCGAATCGAT CCTGGGCCTG ATCCGCGAAA TTGCGGGACA GACCAACCTG
CTCGCGCTCA ACGCCACGAT CGAGGCGGCG CGCGCGGGCG AATCGGGCCG CGGCTTTGCC
GTCGTCGCGC AGGAGGTGAA GAGCCTGGCC AACGAAACCG CGCGCGCCAC CGACGACATC
GCCGGCAAGA TCGCCGCGAT CCAGCAGGCC ACGCGCGGAT CGGTGAGCGC GAATCAATCG
ATCCAGCAAA CGATCGTCGA CGTCCAGCGT TCGGCGCAGC GCATCCGCGA GGCGATGGAT
GCGCAGGCGC AGACGGTCAC GTCGATCACC GCCGCTGTCG ACGAAACGGC ACTCGCCGCC
GACTCGATGT CGTCGACGAT CGCGAGCATC CGTAACGACT CGGGGATGGT CGCGACCGAG
ATCAGCGTGC TGAGCCAGGA GTTCGCCAAG ATGGGCGGAC GACTCCAGCA ACTGGAACAG
GCCGCGAGCG AGTTCAGCAG CCGGGTGGCG TAA
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| Protein sequence | MVKDNPIHKQ QIDPILMSER FPYYDLDGRL AANAAEIHAI IAGREEAVAR AYWDAFNALP
NMDRRVEGEL YDSYVRGSAR HASVKYADAA GQEAATIACQ NTHMARRVKM PLASVMSCIA
ESQRLTIEYV VEACIGDAER LARLTSAINR LALLEFDIMQ RYASKLDRAV ISSERQTLAR
DFDRSIASLV QDTEGVRERL ARQAASADQA AKGMIAKTSE VAAASEQSAM AMREAASTAA
GLIRAIEDAR SEVEASASVA TRASEQAGEA VAMSEALSHH AESIESILGL IREIAGQTNL
LALNATIEAA RAGESGRGFA VVAQEVKSLA NETARATDDI AGKIAAIQQA TRGSVSANQS
IQQTIVDVQR SAQRIREAMD AQAQTVTSIT AAVDETALAA DSMSSTIASI RNDSGMVATE
ISVLSQEFAK MGGRLQQLEQ AASEFSSRVA
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