More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_0882 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  100 
 
 
253 aa  496  1e-139  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  43.48 
 
 
217 aa  123  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  52.44 
 
 
216 aa  79  0.00000000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_011831  Cagg_2575  ATP-dependent transcriptional regulator, MalT-like, LuxR family  54.29 
 
 
917 aa  79  0.00000000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20540  regulatory protein LuxR  41.03 
 
 
887 aa  77.8  0.0000000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1895  ATP-dependent transcription regulator LuxR  62.5 
 
 
867 aa  76.6  0.0000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.283939  n/a   
 
 
-
 
NC_008148  Rxyl_0456  hypothetical protein  50.51 
 
 
163 aa  75.9  0.0000000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0618  transcriptional regulator, LuxR family  60.66 
 
 
196 aa  75.1  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1995  ATP-dependent transcription regulator LuxR  53.03 
 
 
1019 aa  74.7  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.686742  n/a   
 
 
-
 
NC_009767  Rcas_4222  ATP-dependent transcription regulator LuxR  56.92 
 
 
309 aa  73.6  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.157864 
 
 
-
 
NC_013739  Cwoe_1523  ATP-dependent transcriptional regulator, MalT- like, LuxR family  46.55 
 
 
873 aa  72.4  0.000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4163  two component transcriptional regulator, LuxR family  56.34 
 
 
208 aa  72.4  0.000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.296115  normal  0.698078 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  57.14 
 
 
216 aa  70.9  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013739  Cwoe_4360  transcriptional regulator, LuxR family  56 
 
 
381 aa  70.5  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2539  regulatory protein, LuxR  56.92 
 
 
904 aa  69.7  0.00000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.50873  hitchhiker  0.00362349 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  53.12 
 
 
215 aa  69.3  0.00000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1728  ATP-dependent transcription regulator LuxR  56.92 
 
 
870 aa  69.3  0.00000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  55.56 
 
 
215 aa  69.3  0.00000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_008463  PA14_41810  putative transcriptional regulator  56.92 
 
 
901 aa  69.3  0.00000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3548  transcriptional regulator  56.92 
 
 
924 aa  68.9  0.00000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  45.92 
 
 
222 aa  69.3  0.00000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  36.76 
 
 
211 aa  68.9  0.00000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_008740  Maqu_0164  response regulator receiver protein  54.69 
 
 
128 aa  68.9  0.00000000007  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  51.56 
 
 
198 aa  68.9  0.00000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  51.56 
 
 
198 aa  68.9  0.00000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  50 
 
 
217 aa  68.6  0.00000000009  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0423  ATP-dependent transcriptional regulator, MalT- like, LuxR family  33.99 
 
 
1003 aa  68.6  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3477  ATP-dependent transcription regulator LuxR  52.31 
 
 
877 aa  68.6  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  42.53 
 
 
223 aa  67.8  0.0000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_007777  Francci3_0923  ATP-dependent transcription regulator LuxR  55.74 
 
 
1235 aa  67  0.0000000002  Frankia sp. CcI3  Bacteria  normal  0.280541  normal 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  46.94 
 
 
232 aa  67  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.24 
 
 
226 aa  67.4  0.0000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008825  Mpe_A0892  ATP-dependent transcriptional regulator-like protein protein  40.15 
 
 
896 aa  67.4  0.0000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.311866  normal 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  48.15 
 
 
270 aa  66.6  0.0000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_013235  Namu_1062  transcriptional regulator, LuxR family  56.06 
 
 
933 aa  66.6  0.0000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4327  ATP-dependent transcription regulator LuxR  46.88 
 
 
1021 aa  67  0.0000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  46.91 
 
 
268 aa  67  0.0000000003  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0993  regulatory protein, LuxR  48.75 
 
 
920 aa  66.6  0.0000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.962183  normal 
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  51.85 
 
 
198 aa  66.6  0.0000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50 
 
 
250 aa  66.2  0.0000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0377  transcriptional regulator, LuxR family  46.05 
 
 
134 aa  66.2  0.0000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5618  ATP-dependent transcription regulator LuxR  55.56 
 
 
1383 aa  66.2  0.0000000005  Frankia sp. EAN1pec  Bacteria  normal  normal  0.586723 
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  33.87 
 
 
214 aa  65.9  0.0000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  57.89 
 
 
220 aa  65.9  0.0000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4815  ATP-dependent transcription regulator LuxR  43.33 
 
 
924 aa  65.9  0.0000000006  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  54.55 
 
 
222 aa  65.9  0.0000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.75 
 
 
225 aa  65.9  0.0000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_012669  Bcav_0745  ATP-dependent transcriptional regulator, MalT-like, LuxR family  45.35 
 
 
895 aa  65.5  0.0000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4706  ATP-dependent transcription regulator LuxR  52.38 
 
 
911 aa  65.5  0.0000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.157543 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  47.62 
 
 
213 aa  65.5  0.0000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  51.52 
 
 
223 aa  65.5  0.0000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  50 
 
 
229 aa  65.5  0.0000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  47.62 
 
 
213 aa  65.5  0.0000000009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  50.79 
 
 
216 aa  65.1  0.0000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  47.54 
 
 
212 aa  64.7  0.000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_007614  Nmul_A2579  LuxR family transcriptional regulator  44.29 
 
 
257 aa  64.7  0.000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.286869  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  50 
 
 
227 aa  65.1  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  40 
 
 
228 aa  65.1  0.000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1506  ATP-dependent transcription regulator LuxR  52.31 
 
 
876 aa  65.1  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  40.58 
 
 
228 aa  64.7  0.000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_013947  Snas_2088  transcriptional regulator, LuxR family  47.14 
 
 
135 aa  64.7  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1584  regulatory protein, LuxR  50 
 
 
916 aa  65.1  0.000000001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0897  ATP-dependent transcriptional regulator-like protein protein  53.85 
 
 
933 aa  64.7  0.000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.571021  normal 
 
 
-
 
NC_013947  Snas_5235  transcriptional regulator, LuxR family  52.46 
 
 
134 aa  64.7  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.183919  normal  0.452557 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  54.1 
 
 
231 aa  64.7  0.000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013235  Namu_5188  ATP-dependent transcriptional regulator, MalT- like, LuxR family  55.56 
 
 
884 aa  65.1  0.000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0966  transcriptional regulator, LuxR family  52.31 
 
 
134 aa  64.3  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159258  normal 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  46.48 
 
 
224 aa  63.9  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_011831  Cagg_0020  two component transcriptional regulator, LuxR family  50 
 
 
229 aa  63.9  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  44.44 
 
 
214 aa  64.3  0.000000002  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  51.56 
 
 
216 aa  63.9  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0907  ATP-dependent transcription regulator LuxR  49.18 
 
 
850 aa  64.3  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  50.77 
 
 
226 aa  63.9  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_008740  Maqu_2693  regulatory protein, LuxR  52.31 
 
 
891 aa  63.9  0.000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.602772  n/a   
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  53.45 
 
 
292 aa  64.3  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.350857 
 
 
-
 
NC_013757  Gobs_1678  ATP-dependent transcriptional regulator, MalT- like, LuxR family  33.99 
 
 
910 aa  64.3  0.000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  50 
 
 
257 aa  63.9  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  52.38 
 
 
226 aa  64.3  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  49.18 
 
 
222 aa  64.3  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_009656  PSPA7_1706  transcriptional regulator  54.84 
 
 
827 aa  63.9  0.000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  36.47 
 
 
225 aa  64.3  0.000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1088  transcriptional regulator, LuxR family  50.94 
 
 
207 aa  63.5  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  52.38 
 
 
262 aa  63.5  0.000000003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4439  ATP-dependent transcription regulator LuxR  48.65 
 
 
285 aa  63.5  0.000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_19850  putative transcriptional regulator  54.84 
 
 
827 aa  63.5  0.000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.326832  normal 
 
 
-
 
NC_008705  Mkms_4526  putative GAF sensor protein  48.65 
 
 
285 aa  63.5  0.000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  56.14 
 
 
262 aa  63.5  0.000000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  43.94 
 
 
230 aa  63.9  0.000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_009523  RoseRS_2963  regulatory protein, LuxR  49.23 
 
 
824 aa  63.9  0.000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1151  transcriptional regulator, LuxR family  46.25 
 
 
910 aa  63.2  0.000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3086  LuxR family transcriptional regulator  48.57 
 
 
226 aa  63.2  0.000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  33.03 
 
 
209 aa  63.2  0.000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_011831  Cagg_0233  two component transcriptional regulator, LuxR family  50.75 
 
 
219 aa  63.2  0.000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5237  ATP-dependent transcriptional regulator, MalT- like, LuxR family  41.67 
 
 
846 aa  63.2  0.000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4820  putative GAF sensor protein  48.65 
 
 
285 aa  63.2  0.000000004  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2902  LuxR family transcriptional regulator  40.48 
 
 
153 aa  62.8  0.000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  52.46 
 
 
213 aa  62.8  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  52.46 
 
 
207 aa  62.8  0.000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  45.45 
 
 
230 aa  62.4  0.000000006  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  50.88 
 
 
218 aa  62.4  0.000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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