Gene Cagg_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2575 
Symbol 
ID7267164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3138848 
End bp3141601 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content56% 
IMG OID643567399 
ProductATP-dependent transcriptional regulator, MalT-like, LuxR family 
Protein accessionYP_002463880 
Protein GI219849447 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGT TGGTACGCAC CAAACTGCAA CCGCCGGAAG CACGCCCATC GTTGTTAGCT 
CGTCCTCGTT TGTACGAATG GTTGCGGCAC GCTTTACACA GTCGGGTTGT TCTGATCACC
GCACCGGCCG GTTACGGCAA GACTTCGTTG CTCGCCGTAT GGATCGGTGA GTCCGGTAAG
GAATGGTCGC AAATTGCGTG GTTGACCCTC GATGCCGCCG ATAATGATCT ACGCCGGTTG
TTCGCGTATT TGTTGGAAGC ATTACCGCAC TTGTCACCGA CGCGACGGGC ACAGCTTCAA
GCGTTGCTCG AAACTGAAGC TGGTCTGGAT GCGGAACAGT GGTGTGCCGA GTTGCTGAAC
GATCTCGTCG AAATAGGTGA TGCAACGATC ATGGTGTTCG ATGACTATCA CACGATCACC
GATAACCAGA TCCATCACGC AATAGCTTTT CTCGTCGAAC ATCTCCCCCC ACGCTGCCGA
TTGATCATCG CCACCCGTAG TGATCCACCG TTACCACTTG CCCGCTGGCG AGCACGAGGG
CAGTTAGCCG AACTGCGCAG TTTTGATCTG GCCTTTACCC CCGAAGAAGC GGCAGCGTTT
TTGCTTGAAG AAATGGAGTT ACCCCTCGAA CGGGAACAAA TTGTTGCGCT ATTGGAGAGT
ACAGAGGGCT GGCCGGCCGG TCTTCATCTC GCGGCGCTGG CTTTACGCCA TCATCCGCAC
CAAGATAAAC TGGTCAATGC CATTATTTCC GGTAATCGTT ACGTGGTTGA TTACCTGATC
GAAGATGTCT TTAACCAACA ACCGTTCCAC ATCCAACAAT TTTTGTTGCA AACGTCAATC
CTCGACCGGC TGTGCGGACC GTTGTGTGAT GCAGTGATCG GCATCAATGA AAGGGAAATC
AATGAACAGA GCCACAGTTC GTACAGCCAG TCGATCTTGA CCGAACTTGA ACGCAACAAC
CTGTTTCTCT TCCCGCTCGA TACCGAGCGT AATTGGTACC GTTATCATCA TCTCTTCGCC
GATGTGCTGC GTGAACGGCT CGAAACCGGG AGTAGCCCAG ACCGCATCGC CCTACTTCAC
CGACGGGCCG GTGCATGGTT TGCTGCCCAC GGTATGTTGC CGCTTGCCAT CAACCATGCC
TTACGCGCAC AGGCGTTTGA TGACGTAGTC GCAATGATTG AACCGATTGG CCTGGCGGTG
GTGTCACAGG TGGGTGAAGC CACGCTGCGC CGCTGGTTGC CACAAATCCC TGATACGGCC
TTCGAGCAAC ATCCGCGTTT AGCCCTATTA CGCGCGTGGC TGGCAACCAC CGACTATCAG
ATGGAAGATG CAGCATATTG GATCGCCGTC GCCGAGCGGG CATTGGCCGG GGTCGCGAGT
GGCACTGCAA CGTCGTTTGG ACCAATTGCT AATCTGCGCG GCGAATTGAG CGCAGTGCGC
GTCCGACTGG CCGTATTACG CGGTGATAAC GACCGGGTGC TGCAAGAGGG GCAACAAGCG
TTGGCATGGT TGCAAACCGA TAATCAAGCC CTACGGATGC GAGTTGCTAA AGATTTGGGA
TATGCATACT TCGCCCAAGG CGATCTGATG CGTGCCGAGC AAGCGTTTAG TGAGGCAATT
GTCAATGGAT TCAATGCCGG CTTGCCTTAT ATATCGGCGA TGGCCACGAG CGATGATGCG
TATACGAAAG CGCTGCGGGG TTCGATTGGC GCTGCTATTC AGACGTGTCG CGAGACGATT
AACCACATGC TGCGACGCAA CCGCGATCGC GCATCACCCG GTATCGGGTT GCCTTTTCTG
ACGCTGGCCG ACCTGCACGG TGTGCGTCAT GAGTTTGCCG GAGCATTACC GGCATTGGCC
GAAGCCGAGA GTTCGATCAA GCCGGGGAAC ACAACGAGCT ATTTGTGTCT GTTGATCGTG
ACGGCACGGA TCAATCGGGC ACGAGGCGAT GTGGCCGGTG CATTACGTGT TGTGCGGCAG
GCCCGCTTTC TGGCCCGTCA ACGTAAGATT GATTGGGTGC TAGCCGTGTT GAACGGATTC
GAGGCCCAAC TGGCGCTAGA ACAGGGTGAT CTCGTAACCG CCGAGTATCT GCTCGAAGCA
CAACTGCACC CGCCGGTTGA GTTTCGCATG ATGCCGATCG CCGCTTTCTA CGCGCGCGAA
CATATTATCC GCGCCCAGTA CGAATGGCGA TTGGCGCGGG CCCGTGCTGC CGGCGATAGC
GCTGAACTCC ATGCGCTGGC CGCCGCCTTG GCTGCGCCAA CACAAGGTGA GACCTGGCAG
ATGCTGGCTC CCCTTGATGC CGCCCTGCTG CGTGCGCTGG CCCTCCTTGC TGCCGGTGAA
GATGCGACCG ACCTGATCGT GACGGCACTT GATTTGGCGA CGGTTGAACG AATCGTGACA
CCGTTTGTGC AAGCCGGTGA ACCGCTCCGC ATTGTATTGA ACCGGCTTAG TGTGCGCCAA
CGCTTACCGG CCTACGGTGA ATACCTCCTT TCCCTCATAG ACAACGATGA GCCTTTGCCA
ATGAGTATGC CGGTAACGTC GGCACCGCCA ACTTTACCCG AACCACTGAG CCAGCGTGAG
ATCGAGGTCT TGCGCCTGAT GGCCGAGGGG CGCAGCAACC ATGAGATTGC GACAAGTTTG
GTAATCGCGG TGAGCACGGT GAAATCGCAT ATCAACAATA TCTTTAACAA ACTAGGCGTC
GCCTCACGCA CGCAAGCGGT GGCACGTGGG CGACGGTTGG GGTTGATTCC GTAA
 
Protein sequence
MMPLVRTKLQ PPEARPSLLA RPRLYEWLRH ALHSRVVLIT APAGYGKTSL LAVWIGESGK 
EWSQIAWLTL DAADNDLRRL FAYLLEALPH LSPTRRAQLQ ALLETEAGLD AEQWCAELLN
DLVEIGDATI MVFDDYHTIT DNQIHHAIAF LVEHLPPRCR LIIATRSDPP LPLARWRARG
QLAELRSFDL AFTPEEAAAF LLEEMELPLE REQIVALLES TEGWPAGLHL AALALRHHPH
QDKLVNAIIS GNRYVVDYLI EDVFNQQPFH IQQFLLQTSI LDRLCGPLCD AVIGINEREI
NEQSHSSYSQ SILTELERNN LFLFPLDTER NWYRYHHLFA DVLRERLETG SSPDRIALLH
RRAGAWFAAH GMLPLAINHA LRAQAFDDVV AMIEPIGLAV VSQVGEATLR RWLPQIPDTA
FEQHPRLALL RAWLATTDYQ MEDAAYWIAV AERALAGVAS GTATSFGPIA NLRGELSAVR
VRLAVLRGDN DRVLQEGQQA LAWLQTDNQA LRMRVAKDLG YAYFAQGDLM RAEQAFSEAI
VNGFNAGLPY ISAMATSDDA YTKALRGSIG AAIQTCRETI NHMLRRNRDR ASPGIGLPFL
TLADLHGVRH EFAGALPALA EAESSIKPGN TTSYLCLLIV TARINRARGD VAGALRVVRQ
ARFLARQRKI DWVLAVLNGF EAQLALEQGD LVTAEYLLEA QLHPPVEFRM MPIAAFYARE
HIIRAQYEWR LARARAAGDS AELHALAAAL AAPTQGETWQ MLAPLDAALL RALALLAAGE
DATDLIVTAL DLATVERIVT PFVQAGEPLR IVLNRLSVRQ RLPAYGEYLL SLIDNDEPLP
MSMPVTSAPP TLPEPLSQRE IEVLRLMAEG RSNHEIATSL VIAVSTVKSH INNIFNKLGV
ASRTQAVARG RRLGLIP