Gene Snas_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2088 
Symbol 
ID8883281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2216640 
End bp2217047 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003510875 
Protein GI291299597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAA TCGCCACACC CGACCTGCGC AATCCCGTCA TCGCCTGGGA AGTCATCGCC 
CGCTCCGCGG TCCACATCGT CCGCGAAGCC CGAGCCAGCC GACGCCTGGA ACCACTGACC
ATCGACGGGC GCATGCTGCT GACCGCTGTG ACCGCGTTGG GCATCGACCT CGACGTCCCC
AAAACCGTCT CCGTGCCCGC CAGCCTGCGA CGCGGCCTGT CCCAACGCGA AACCCAAGTC
CTGCTGGGCA TCGCGGGCGG CAAATCCAAC GCCGAGATCG GCCGCGAACT GTTCATCACC
GAAGACACCG TCAAAACCCA CGCCCGACGC ATGTACCGCA AACTCGGCGC CCGCGACCGA
GCCCACGCCG TCGCCGAAGC ATTCCGCACC GGAATCCTGC GCGCTTAG
 
Protein sequence
MSTIATPDLR NPVIAWEVIA RSAVHIVREA RASRRLEPLT IDGRMLLTAV TALGIDLDVP 
KTVSVPASLR RGLSQRETQV LLGIAGGKSN AEIGRELFIT EDTVKTHARR MYRKLGARDR
AHAVAEAFRT GILRA