Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0907 |
Symbol | |
ID | 3715810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1053183 |
End bp | 1055735 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ATP-dependent transcription regulator LuxR |
Protein accession | YP_346639 |
Protein GI | 77457134 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA TGACCCACGC TCCGGATCGT CCGGGATTCT TGCCCAGACT CTCGGCTCAT CATCTTCCAC GTCCACGTCT GACTGCATCA TTGCTCGAGT CTTCGGCACG GGTCCGGCTG ATCTGCGCAC CGGCCGGCAG TGGCAAGAGC ACGCTGTTCA CCGAATGCCT GTTGCAGGCG CCCCTCGAAT GTACGGTGTG CTGGCTGCCG CTGGCGGGCC TGTCGATGAG TGTCGCGGCA TTTTGCGAGC GACTGGCGCA GGCATTGGGG CTGGCAGCGG CGGATGAGTC GTCGTTGCTA AATGAACTGG CGCGCCGGTC CTCGCCGGTC TGGGTGTTTC TCGACGATTA CTGCCGTGTT GAAGAACCCG CGCTGGATGC ATTGCTCGAC CGGATGCTGG CGCTTGCCAG TCCCGCCGTC ACCTGGTGGA TCGGCACCCG TCGACGCCCG CAATGCAACT GGCCGCGCCT GCTGCTTGAT GACGCCGTGT ACGAGTGCGA ACGCGCGGCG CTGGCGTTGA GTCGCGGCGA GATTGCACAA CTGTTGCGGC ACCTGCCGCC AGCCCAGGCC GGCGACGTAG CCGGGCGAAT CCTCCAGCGC AGCGGTGGGT GGTGCGCCGG GGTGCGGATC CTGTTGATGC AAAAATGCGA CTGGTCGCAA AAGACCTTGC CGCAGCAACG CATGGACACC TTGCTGGACT ATCTGCAACA CGAACTGTTC AGTGGTTTGA GCCCGGAACT GGCAGAGGCC TGGCGGGTGT TGGCGCATTT GCCGCGGTTC AACGCCAGTC TGTGCGATCA CCTGTTCGGT GCCGGCGAAG GGGCGCAGTG GATGCGCACG CTACAAACCC TCGGGTGTTT TATCGAACCC TGGCAAGGGT CGCCGGACTG GTTGCAGGTG TGTGCTCCGC TGTCGCGTTT GATGCGCGAC GAACCCTGGT CGGCCGGACG TTCCTGGCAT CGCCTGGCCT GCCAGTGGTT TGCTGCCGGC CAGCATTGGA AATGCGCCTT CGAACAGGCG TTGCTGGCCG AAGAGTACGA AGTCGCGGTG AGCCTGCTGC AGCACTTTAC GTTCGAGCAT CTGTTCGAGG AGCAGACGGT TGTGCTGTTG TTGCGCCTCT ACGAGCAGCG AGGCGAGGAA TTGCTGCTGG GTTCGGCGCA ACTGGTCGGG CTGATCACGG CAGCGCTGTT GTTTGCCGGG CGTTTTGCCC AGGCGGCGGA TTGCATCGGG CAACTGTCGC GTTTTCTTCC GCCGCCGTCG GCGAGTCAGC AACGGCAATT GATCGCGCGC TGGCAGGCTC AGCAAGGCTG GCTGTTGCAT TTGCAGGGGC ACATGGACGA GGCGCGCGCG CATTTCGAGC AAGCCTTGAA CGATCTTTCG CCGCAGGCCT GGACGGCGCG CCTGCTGTGC CTGTCGGGCC GCACTCAGCA AGCGTTGCTG TGCGGTGATC TGGAGCTGGC GCATTCGATC AATCGTGAAG CGTTGTGCCT GGCCCGGGCC GAGGGGTCAT TGCTGTTCGA GGCGTTGCTG GAGCTGGATC ACGCCCAGCT GCTGGAGCAA CGGGGGGCGA CGGCTCGCGC CGAAGACTTG CTGGCCGGTC TTTGCGAAAT GCTCGGCGCG TCCGTCGAGC GACCGACGCC GATGCTGGGG CGCATCGCCC TGCGTCGAGG GCGGCTGGCA CTGACCATGG GGCAGCAAGG CCGGGCGGCC GTGTTCTTTC AACAAGGGCT CGACGACTGC CTGCGCAGCT ATGACAAACG AGTGCTGTAC GGCTTTCTGG GACAGGCACA ACTGGCCGCC GATCAGGGCG ATTATCCGCG GGCATTCATG CGTCTGCGTG ATGCAGAGCG GCTCATGCAA CAGCGGCAGA TTCCCGACAC GGTTTATCGC GGCGTTCTGC TGCAGGTCAG CAGCGAATTC TGGTTGCAAC AAGGGCGACC AGAACTGGCT CGCGAAGCAT TGAGTCGCGT GCTCAGGCAC TATCGTGGCC CGCGCGCACG GCAGGCCCCG CCGGCGACGC TGGAACTGGT TCCGCGCATC GAGTGTTTGT TGATTCTGTC CGAGACCCGC TTGCATCAGA TGCAAACCTC TCTGGTTCGC CTGCGTGCCT TGCTGACGTC GGCACAGGCT CGAGGAATGG TGAGGCTGGA GGCCGAGTTA CTGTTGACGC TGACCGAAGT GGCGCTGATC CTGGGCGAGC CAGATCAAGC CAGGAGTTTC TTCGATCAGG GTTGCCAGAT CATAACGCGC TGCAGCCTGC AGCAAATGCT GGCTGAGCTC TATATCCGAT GCGTGGAGAT GCCCTCGCGC TGGCGCATTG ATGAAGCAGC GGAACAGGTG GACGAACAAT CTACGACGAT CAACCCTCTC AGTCAGCGAG AACTTAAAGT CCTGCAACTG ATTGCCTTCG GCGATTCCAA TCTACAAATT GCCGAGAAGT TGTTCATCTC ATTGCATACA GTAAAAACTC ATGTCCGTCG TATACATAGC AAATTGGGTG TTGAGCGCCG AACTCAGGCG GTGGCGAAGG CCAAGTTGCT GAATTTGTGT TGA
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Protein sequence | MTAMTHAPDR PGFLPRLSAH HLPRPRLTAS LLESSARVRL ICAPAGSGKS TLFTECLLQA PLECTVCWLP LAGLSMSVAA FCERLAQALG LAAADESSLL NELARRSSPV WVFLDDYCRV EEPALDALLD RMLALASPAV TWWIGTRRRP QCNWPRLLLD DAVYECERAA LALSRGEIAQ LLRHLPPAQA GDVAGRILQR SGGWCAGVRI LLMQKCDWSQ KTLPQQRMDT LLDYLQHELF SGLSPELAEA WRVLAHLPRF NASLCDHLFG AGEGAQWMRT LQTLGCFIEP WQGSPDWLQV CAPLSRLMRD EPWSAGRSWH RLACQWFAAG QHWKCAFEQA LLAEEYEVAV SLLQHFTFEH LFEEQTVVLL LRLYEQRGEE LLLGSAQLVG LITAALLFAG RFAQAADCIG QLSRFLPPPS ASQQRQLIAR WQAQQGWLLH LQGHMDEARA HFEQALNDLS PQAWTARLLC LSGRTQQALL CGDLELAHSI NREALCLARA EGSLLFEALL ELDHAQLLEQ RGATARAEDL LAGLCEMLGA SVERPTPMLG RIALRRGRLA LTMGQQGRAA VFFQQGLDDC LRSYDKRVLY GFLGQAQLAA DQGDYPRAFM RLRDAERLMQ QRQIPDTVYR GVLLQVSSEF WLQQGRPELA REALSRVLRH YRGPRARQAP PATLELVPRI ECLLILSETR LHQMQTSLVR LRALLTSAQA RGMVRLEAEL LLTLTEVALI LGEPDQARSF FDQGCQIITR CSLQQMLAEL YIRCVEMPSR WRIDEAAEQV DEQSTTINPL SQRELKVLQL IAFGDSNLQI AEKLFISLHT VKTHVRRIHS KLGVERRTQA VAKAKLLNLC
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