| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2963 |
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| Symbol | |
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| ID | 5209931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3706411 |
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| End bp | 3708885 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596555 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001277277 |
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| Protein GI | 148657072 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGGA AGCGTGCTGA TACGGCGCTG GCATGGCTGA CGCTCGACGA ACACGACAAC
GATCCGATCC ACTTCTGGCG CTACGTGGCT CTGGCAGTGC ACAGCGCCAT CAACAACTGC
GGCGCCGCAA TGATCGAGGC GCTGGCAGGA CCGCAACCGG CGCCGATTCG ACCACTGCTT
GTTGCGACGA TCAACGAGAT AGGAGCGCAG GAACAGCACC TCGTCCTTGT GCTGGACGAT
TATCATTTCA TCGATCTGCC CGCCATTCAT GACGATCTGG CGTTTCTTCT GAATCACGCG
CCCCCGAACC TGCATGGTGT GATCATCACG CGCGCCGACC CGCCACTGCC ACTGCACCGC
TGGCGTGCAC GCGGTCAGTT GCTCGAGGTG CGGATGGACG ATCTGCGCTT CGATCTGATG
GAAGCGGCGG AGTTACTCAA TGGGGTCATG CGCCTGGGGT TCGATGAAGA GGATATAGCG
ACTCTGCTGC GGCAGACCGA AGGATGGCCT GCTGCTCTCT ACCTGGCAGG GCTGGCGTTG
CGCGAAGACG ATCCTGCAAC CCGGCGTCAG CGCATCGCAC GACTGGCGCA GAGCAACCGG
TTCATCATCG AATATCTCAC CGAAGAGATA CTGGCGCAAC AACCTCCAGA CGTGCATGAG
TTCCTGCTGT GCATCTCCGT TCTGGAACGA TTCTGCGGTC CGCTATGCGA CGCCGTTGCC
GGCAGGAGCG GCAGCGCCGC GCTTCTCGAA TCACTGGCGC AACGCAATCT GTTTCTCATC
CCGCTCAGTA CTGCGGCAAA CGACAATGAG CGCTGGTTTC GTTTTCACCG GTTGTTTGGC
GATCTGCTGC GCAGTCAGTT ATCGAGCACT CATTCGGCGG ATATTCCTGC ACTGTACCGG
CGCGCGGCAG CCTGGCACGC TGCGCGTGGC GACATCGAGC AGGCCATCGA GTATGCCCTG
GCAGGGCGCG ATTTCGATGC TGCCACGCAT CTTCTTGACC GGGCCGCCAG CACGCTGGTG
ATGGAAGGAC GGGCAGCGCT CCTTGAACGC TGGTTGAACC TCTTGCCCGA CGAACTGCGA
CAGACATTGC CGCACGCCAG CATTGCCTTT GCCTGGGCGC TCATTCTGCG CGGGCGGTAT
AGCGAGGTCG AGCCGTACAT TGTACAGGTG GAAACGATCA TACCGGCAGA CGACCCTGCA
CTCCGTGGTG AACTCCATGC CGTGCGCGCC GTCCTCGCCG AAATCAAAGG ACAGCTGGCA
GAGGCGCTCC ACCACGCGCA GCAGGCGCTC GACCATGCCC CTTCCGATCA TCGTATCGCC
CATGCAGTGG CAAAGACGGC AATTGCTGGA GCGCTGCGCG CGGCTGGCGA TGTAAACGCC
GCTATCGTTG CATATGAACA GGCTGTGCCG CTCTGTGTCG CCGCACGCCT GCCACTGCCA
GCGCTCCTGG GGCGCGCGCA TCTCGGCATG CTGTATCTGG TGCAGGGAAG GTTGCGCAAC
GCCGAGGCGA CGGTGCGACC GGTTTTGACC TCAGCGGCGT TTATGCCTGC CGCTGCACCC
GCTTTTATTG CGTACAGCGC GCTTCTGATC GAACGCAACC AGCTGGACGA AGCCCGGCAG
CAGTTGCAAC ACGCACTCAA CCTGGCGCAG CAGAGCGGAC ATACCGCTGC GCTGGCGCAA
TGCTTTATTC ATCTGGCGCG GGTGCAGCGC GCCCTCGGCG ACTTCGCAGG CGCCCAGGCC
GCACTCGATG CCGCTGCCGC ATATGTTGCC CAGGGTGTTC CAGTATGGAT CGAACCGATG
CTGATCGCCG AACGTGTGCA TCTCTACCTC GATCAGGGCG CAGTGACGAA AGCCAGGCGT
GTACTGACCG GGCACGGTAC ACATAGCGAC TCGGTTGCTG GAGTGAGCCG GGAGGCGGTA
CCGCTGGCAC GCGCACGCCT GCTGCTGCAC CAGGGGCGCA ACGCCGACGC GCGCGCACTG
CTTGATGAGG TGATCGCTCT GGCGGAAGCA TCTGATCGGC AGGGAAGAGT CATCGAGGCG
CTGGTGCTGC GTGCACTGGC AAACGATGCG TTGGGTGACG AGTCCGCTGC GCTCGACGAT
CTGCGACGCT CAGTGACCCT GGCGGCGCCG GAAGGGTTCG TGCGCGTCTT CCTCGATGCA
GGCCCGCGTA TGGCAAAACT GCTCTATCGC GCAGGCAGCC CCGCTGCCCA TCGTCTGCTG
GAAGCGTTTC CTCCGACGAT CCGTGAGCGC AGCGCCACAC TGTCAGAACT GAGCGAACCG
CTCAGCGAAC GCGAACGTGA CATTCTGCGC CTGATGGCGC GTGGATTGAC CTACCGACAG
ATTGCCAGCG AACTGATGAT CAGCATCAAC ACGGTGCGTT ACCACGTCAA GAGTCTCTAC
AGCAAACTCC AGGTCAGCAG CCGCACCCTG GCGCTTGCCC GCGCGCGCGA TCTCCATCTG
CTCGATGGGG CATAA
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| Protein sequence | MLRKRADTAL AWLTLDEHDN DPIHFWRYVA LAVHSAINNC GAAMIEALAG PQPAPIRPLL
VATINEIGAQ EQHLVLVLDD YHFIDLPAIH DDLAFLLNHA PPNLHGVIIT RADPPLPLHR
WRARGQLLEV RMDDLRFDLM EAAELLNGVM RLGFDEEDIA TLLRQTEGWP AALYLAGLAL
REDDPATRRQ RIARLAQSNR FIIEYLTEEI LAQQPPDVHE FLLCISVLER FCGPLCDAVA
GRSGSAALLE SLAQRNLFLI PLSTAANDNE RWFRFHRLFG DLLRSQLSST HSADIPALYR
RAAAWHAARG DIEQAIEYAL AGRDFDAATH LLDRAASTLV MEGRAALLER WLNLLPDELR
QTLPHASIAF AWALILRGRY SEVEPYIVQV ETIIPADDPA LRGELHAVRA VLAEIKGQLA
EALHHAQQAL DHAPSDHRIA HAVAKTAIAG ALRAAGDVNA AIVAYEQAVP LCVAARLPLP
ALLGRAHLGM LYLVQGRLRN AEATVRPVLT SAAFMPAAAP AFIAYSALLI ERNQLDEARQ
QLQHALNLAQ QSGHTAALAQ CFIHLARVQR ALGDFAGAQA ALDAAAAYVA QGVPVWIEPM
LIAERVHLYL DQGAVTKARR VLTGHGTHSD SVAGVSREAV PLARARLLLH QGRNADARAL
LDEVIALAEA SDRQGRVIEA LVLRALANDA LGDESAALDD LRRSVTLAAP EGFVRVFLDA
GPRMAKLLYR AGSPAAHRLL EAFPPTIRER SATLSELSEP LSERERDILR LMARGLTYRQ
IASELMISIN TVRYHVKSLY SKLQVSSRTL ALARARDLHL LDGA
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