| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_20540 |
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| Symbol | |
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| ID | 7314378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 2218266 |
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| End bp | 2220929 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643612498 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_002509794 |
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| Protein GI | 220932886 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATA ATCTTAAAAA AGACTTTAAT TTAACAGCCT ACTTGAAAAC AAAATTACAT
CCAGCACCTT TACCTTCTGG TATCATTCAC CGTGAAAGAT TATTAAATAA ACTTGCTGAG
GGTAGAAAAA ACGGAACTAA ATTAATATTA GTTTCTGCTC CGGCAGGGTA TGGTAAATCT
ACCCTGATTA CTGACTGGCT TGTAAGGGAT AAGATTAAAC ATGCCTGGCT CTCTATTGAA
GATGAGGATA ACAAATTAGT TCCCTTTTTT GAATATCTGT TATCCTCCCT CCAGGAAATT
AGTGAAGGTT TTGGGAAAAC AATCAGGAGT ATACTGGCTT CCCCCCAGCT GCCACCTATC
AATGTCCTCA TTTCTTTGTT AATCCAGGAA TTGGAGGCTT TACCCGCACC ACTTACCATT
GTTCTGGATG ACTATCATTT TATTTCAAAC AGGCAAATAA ACCAGGGGAT TTCTTATCTC
CTGGAGCACC TACCTTTAGA TTTTAAGTTG GTTATTATTA GCAGGCAGGA TCCCCCCATT
CCCCTGGGCC GTTTGAGGGC AAATAATCAG CTTACTGAAA TAAGAATGAA GGATTTAAAA
TTTAATAAGC AGGAGGCTAG TTCTTTTTTC GAAGAGAACC TGCAGATAGC TCTTAATGAA
GAGGAGGTTT CTCTTCTTAA TTCTCGTACT GAAGGCTGGG TATCTGGCTT ACAGCTTGCC
GGGTTATCGT TAAAAGAGTC TGCAGAGGGA GAAAGAAAGG TATTTATTGA TAATTTTTCG
GGAAGTAATC GTTTTGTTAT TGATTACCTC TTTGAAGAGG TTCTGGTCAG GCAAAAGCCT
GAAGTCAAGG ATTTTCTTTG TAAAACCTCA GTTTTGAATA AATTTAATGA TTCAATCTGT
AATAGATTAA CAGAAGACAG TAATAGTAAA AGTGTTATAA CAGAGCTGGA TAAAGGCAAT
CATTTTATCA TACCCCTGGA TGTAAATAAA AGCTGGTATC GTTATCACCA CTTATTCCGG
GATTTCTTAA CCTCTGAACT CTCTTTAGAA GAAAAAAAAG GATTACACAA AAAAGCTGCA
AGCTGGTATG ACGAAAGGGG CTATCTGCAT GAGGCCATAT ATCATTCCAG GGAAGCAGAT
GATTTAGACC TTTTAGAGAG GCTAATTACT AAGCTGACTA TTGATTTATT TAATAAAGGG
GAAGTTGAAA CCCTTTTAGA ATATCTCGAA TATTTACCAG AAAAAAGGCT TAAAAAAAAT
AGTAAACTCT TAATTTTTAA AACCTGGTGC CTGTTTTTGA CTGGAAAGGG GAGGGAAATA
GCTGGTTATC TCCAGCTTAT CAAAGACAGG GAAGATATTA ATAAAAATGA CTCTTATTAT
GGTTTGTTTT TAGCCTTAAT AGTCCTTTTT GATCATCAAG AAAAAAACCT GGAGATGGCT
GAAAAAGCGG TAGACATGAT TGATAATAAA GAACACTTCT TTCGAATAGC TGCTTTATTA
TCCCTGGGGC AGGTTCAGGC CTCCATGGGG AAATATAGCG AGGCGGTTAT TACCTTTAAA
GAGGCAATGA ATATTGGGAA GAAGACAGAC TTTCATTTTG GCACCATTAC TGCTTTAATC
AATCTTGCCG TAAATTTAAA CTGGCTGGGT CAGAGAAAAG AGGCAGTTTT AATCTGTGAG
AATTCCCTTT ATGAATATAC CGATTCCAGG GGAAAAATTT ATCCCCTGGC CAATTTAATA
TATATTCCTC TGGGAATCCT CAAATATGAA AATAACCAAC TTAAATCAGC TTATAGTTAT
CTTCAAAAGG GGATAACTTT TTGCCAGGAG TGGTCCTTTG TCAGGATTAT GGGCCTTGGG
GAATGGTATA TGGGACAGAC CCTCTTTGCC CTTGGAAAGA AAGAAGAAGC GATAGAATTT
GTTGAAGAAA TAATTAACCT GGGTAAGCAG CTGGGTTTAA AGGGTCTTAT CTTTTTTATG
AATTGTCTGG AGGCTGATTT ATATGTAAAA GCAGACAATA AAGAAAAAGC TTTTCTCTGG
GCAGAAGAAA TAAAAAAATT CCCTGACCAG ATGATAACTA TTTCAGGGAT ATTTATGGGG
TTTACCTATA CCCGGGTTTT ACTGAGTCAA CGCAAAATAG AAGAAGTTGA CTCTATTTTG
TCCAGGATTA ATAATCTGGG GGTTAAGGGG CGTAATCTTA TTACTGTTAG ACTTTTACAA
ACTAAAATCA GTTATCTGGA GGGTAAAAAA AATAAGGCTT TAAAATGTCT GGTTGAAGCA
GTTAAATTAG CTAGACCAGA GGGGTATACC AGAGCATTTC TAGATGAGGG TGAAGTAATT
TATAAACTTT TATCTGAAGT TAAAGATGTT TCACCGGCTT TCATTACTGG TATTCTTGAG
GCCTTTGACT TTAAAAAAAG CACATTTAAT AATCAAAATT TGATTGAACC TCTAAGTGAG
CGAGAACTTG AAATTCTGGG GTTAATTGTT AATGGTTTAT CTAATAAAGA GATTGCTAAA
AAGCTTTATA TTACAGTAGG TACTACTAAA TGGCATATAA GCAATATTTA TGGTAAATTA
GGTGTTAATA AACGTGCTCA GGCTATAAAA AAAGCTTTAC AATTAGAACT GATTGCCGCT
CCCGGACCAG AAGAAAACCT TTGA
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| Protein sequence | MSYNLKKDFN LTAYLKTKLH PAPLPSGIIH RERLLNKLAE GRKNGTKLIL VSAPAGYGKS
TLITDWLVRD KIKHAWLSIE DEDNKLVPFF EYLLSSLQEI SEGFGKTIRS ILASPQLPPI
NVLISLLIQE LEALPAPLTI VLDDYHFISN RQINQGISYL LEHLPLDFKL VIISRQDPPI
PLGRLRANNQ LTEIRMKDLK FNKQEASSFF EENLQIALNE EEVSLLNSRT EGWVSGLQLA
GLSLKESAEG ERKVFIDNFS GSNRFVIDYL FEEVLVRQKP EVKDFLCKTS VLNKFNDSIC
NRLTEDSNSK SVITELDKGN HFIIPLDVNK SWYRYHHLFR DFLTSELSLE EKKGLHKKAA
SWYDERGYLH EAIYHSREAD DLDLLERLIT KLTIDLFNKG EVETLLEYLE YLPEKRLKKN
SKLLIFKTWC LFLTGKGREI AGYLQLIKDR EDINKNDSYY GLFLALIVLF DHQEKNLEMA
EKAVDMIDNK EHFFRIAALL SLGQVQASMG KYSEAVITFK EAMNIGKKTD FHFGTITALI
NLAVNLNWLG QRKEAVLICE NSLYEYTDSR GKIYPLANLI YIPLGILKYE NNQLKSAYSY
LQKGITFCQE WSFVRIMGLG EWYMGQTLFA LGKKEEAIEF VEEIINLGKQ LGLKGLIFFM
NCLEADLYVK ADNKEKAFLW AEEIKKFPDQ MITISGIFMG FTYTRVLLSQ RKIEEVDSIL
SRINNLGVKG RNLITVRLLQ TKISYLEGKK NKALKCLVEA VKLARPEGYT RAFLDEGEVI
YKLLSEVKDV SPAFITGILE AFDFKKSTFN NQNLIEPLSE RELEILGLIV NGLSNKEIAK
KLYITVGTTK WHISNIYGKL GVNKRAQAIK KALQLELIAA PGPEENL
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