| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5237 |
|---|
| Symbol | |
|---|
| ID | 8450868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5838645 |
|---|
| End bp | 5841185 |
|---|
| Gene Length | 2541 bp |
|---|
| Protein Length | 846 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645044268 |
|---|
| Product | ATP-dependent transcriptional regulator, MalT- like, LuxR family |
|---|
| Protein accession | YP_003204492 |
|---|
| Protein GI | 258655336 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGG CAGTCGCCGC CCCGGTGACC CTGATTAGCG CAGGTCCCGG CAGCGGAAAG
ACCCTGGCCC TGGCCGACTG GGCCCAGTCG ACCAACCGGC GAGTGGCCTG GCTGAGCGTC
GGGGCGTCGG ATGATGCCCT GCCCGCGTTC TGGGCGGCCC TGGTCGCCGC ACTGCGGGCA
TCCGGTGCGT CGGTGGGCAG CGGGCTGAGC GATTTATTGC CGGCGGCGAG CTTCGGCGAG
CAGGACGCGC GGCGGGTGGT GGACACGCTG GCTCAGATGC GGGCGCCTCT CACGATCGTG
CTGGATGACC TGCACCACGT GCGCGACCGG CACGTCCTCC GGTCGGTCGA GACGCTGTTC
GAATGCCTCC CGCCAACAGC CCACGTGATC GTCAGTGCTC GCTTCGACCC GCCGTTGCGG
TGGCGCCGGC TGGCGGTCGC CGATCGGCTG GTCGAGATCA GGGCCGATCA GCTGGCCTTC
GACGCCGCGG AGGCGGGCCA GCTGCTGACC ATGGTGGGCC TGCGCCTGGG TCCCGCACCA
CTGGGCCGAC TGGTCGAGCG GACCCGCGGC TGGGCGGCGG GTTTGCGCCT GGCTGCATCC
GCGCTGGATC GGAACGCTCC CGAGGCTGCA GTGTCCAGGT TGCGGGGGAG CGACCGGCCG
GTTGCCGACT ACCTCATGCA GGAGGTACTC GACCAGCTGC CCGATGCTGA TCGCGATTTC
GTGCTCCGGT CCAGCGTGGC GGACCCGGTG TCCGCCGAGA TGGCCCAGGC GTTGACCGGG
GTGGTGGACG CCCAGGCCCG GTTGGAGAGT CTGGAGGCCA CCAATGGTTT TGTCGTTGGC
TTGGCCGGCG GCCGCACGTG GTTCACCTGG CATCCGTTGT TCCGTGAGTT GCTGCTGCAC
CGGCTGACAG TGGAGAAGCC GGGTGCCCGG GACGATCTGC ATCAACGCGC GGCCCGCTGG
CTGGTTGGGC AGGGCGACTA CCTGGCTGCG ATCCGGCACC TGACCGCGGT GGCCGACTGG
CCCGGGGTGG GCCGTCTCCT CACCGAACGG CTCGCCCCCG ACGTGGTGAC CTCCGCCGCG
TCGGCGCTGG TGGAGGCCCT GACCCCGGTG GCCAACCGAG CCGAAGTCGA TCCGAATGCG
ACAACATTGC TGGCATCGGC GGTCTGCAAC TTTCATCACT CCGAGTACGC GGCAATGATC
CGCGATGTCG AGGCGGCCGA GGCGGCCGCC CGTCGTGAGC ACAACCCCAT CGCCGTCGAG
GTGCTGGCGT CCAGCCTGCG GATGGCCCAT TCCAGAGCCT TGGATCCGGC GACTCTCACC
CGCACCGCCC GACGCGTCCT GGAAGTAACC CGTCCGATCT CCCGACCGGA CGTCCCGGCT
CTGGAACGGT ATCGGGCGAT CGCGACCACG AACCTGGGCT CCGGCCTGTT GTTGGACGGC
GACCTGAGTG CGGCCCGATC GGCCCTGATT GAGGCCCAGA AGTCCTGCAA CCGTTGGGGT
CTTGGGCTTT CGGAGCTGAC CGCGCGGGGA GGCCTGGCGT TGCTGGCGGC GCTACACGGG
CAACCAAGAA TCGCGCTTGA GCGGGCTCGG GCTGCTCGGG CGACTGCCGA CCAATACGGC
TGGGCACCCG AACCGCAGGC GGCCGCGCAC ATGACCGCTC TCGTAATCGT CGCTCTCGAC
ACGGGCGAGG TTCAGGAGGC CGAGCAGTTG CTCGGGTTAG GCACTCGGGA TACCAATCTG
GCCCTGGCCA GCCGGATCAT GTTTGCCGTG CTGGCGTTGC AGGCGGCGAT CGCGCGCGAC
GATTTATCCT CGGCGGACCG ACGGGCGGGA TTGCTTGCCC TGACCGCCCA ACGCATCGCC
TTGCCGCGGT TGCTGGCCGG TTGGGTATCC GTCGCGCAGG CCGAGCACCT GCTCGCTCAC
GGTCGGGTGG AGGACGCACG GCAGGTGCTG GGCCAAATCT CCGACGGTGG GTACCCTGCG
GCCCGGCGCG ACCTCAACCT GGCCAGGTGT CATCTGGCGC AGGACGATCC GAGGCGCGCA
CTGCAGTCCT TGACGGCGTT GATCCCGAGC CTGTCGGCTT ACCGAACCGT CGCGGTGCAC
GCGCGGGTCG TGGCGGCCGT GGCCGCGATC CGGCTCCGCA AGGACGCCCA GGCTCTTGAC
CTGCTGACCG ACGCGGTCGA GCTGGCGGCC GAAACATCAA TGCTGGGGCC GTTTCTGGCC
GCCGGTCAAC CCTTGCGGCC GCTACTGGCC CGCTACCGCA CCGTCGTCGG TCGACATGCT
GAGTTCACGA CCGCCGCGCT GGGTGGAGTG CCGCCCGGCG AGCAACCCAT CCCGGTTGCG
GCGAATGGCC AGGAATTGAC CGAGCGTGAA CGAGCGGTTC TGCCATTTCT GGCCACCCAT
CTGACGGCCA CCCAGATCGC CGAAGAGCTG TTTCTGTCGG TCAACACCGT CAAATCCCAC
CAGCAGGCGA TCTACCGCAA GTTCGGGGTG TCCTCGCGGC GGGCGGCGGT GGACCGGGGC
CGCGACCTCG GGCTGATCTG A
|
|---|
| Protein sequence | MDRAVAAPVT LISAGPGSGK TLALADWAQS TNRRVAWLSV GASDDALPAF WAALVAALRA
SGASVGSGLS DLLPAASFGE QDARRVVDTL AQMRAPLTIV LDDLHHVRDR HVLRSVETLF
ECLPPTAHVI VSARFDPPLR WRRLAVADRL VEIRADQLAF DAAEAGQLLT MVGLRLGPAP
LGRLVERTRG WAAGLRLAAS ALDRNAPEAA VSRLRGSDRP VADYLMQEVL DQLPDADRDF
VLRSSVADPV SAEMAQALTG VVDAQARLES LEATNGFVVG LAGGRTWFTW HPLFRELLLH
RLTVEKPGAR DDLHQRAARW LVGQGDYLAA IRHLTAVADW PGVGRLLTER LAPDVVTSAA
SALVEALTPV ANRAEVDPNA TTLLASAVCN FHHSEYAAMI RDVEAAEAAA RREHNPIAVE
VLASSLRMAH SRALDPATLT RTARRVLEVT RPISRPDVPA LERYRAIATT NLGSGLLLDG
DLSAARSALI EAQKSCNRWG LGLSELTARG GLALLAALHG QPRIALERAR AARATADQYG
WAPEPQAAAH MTALVIVALD TGEVQEAEQL LGLGTRDTNL ALASRIMFAV LALQAAIARD
DLSSADRRAG LLALTAQRIA LPRLLAGWVS VAQAEHLLAH GRVEDARQVL GQISDGGYPA
ARRDLNLARC HLAQDDPRRA LQSLTALIPS LSAYRTVAVH ARVVAAVAAI RLRKDAQALD
LLTDAVELAA ETSMLGPFLA AGQPLRPLLA RYRTVVGRHA EFTTAALGGV PPGEQPIPVA
ANGQELTERE RAVLPFLATH LTATQIAEEL FLSVNTVKSH QQAIYRKFGV SSRRAAVDRG
RDLGLI
|
|---|
| |