| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4815 |
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| Symbol | |
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| ID | 5750418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5315339 |
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| End bp | 5318113 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641299931 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001565829 |
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| Protein GI | 160900247 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCC CAGCGCCCAC CCCTTCCTCC GGCCCCGGTC CGGGTTCCGG CTACGTGCCG
CAGGCCAAGC TGAGCCCGCC GCGCGCCGCT GCCGCCCAGG TGGCCCGGCT GGCCGTTGCC
GCGCGCTGGC CCGAGGCCTT GCGCGCCCGC GTGGTGCTGG TGCGCGCCCC TGCCGGCTTC
GGCAAGACCA CGGCCATGCG CCAGATGCGC GAGCGCCTGC AGGCCGAGGG CCAGGCCACG
GCGTGGCTGA CGCTGGATGC CGCCGACAAC GATGTCTCAC GCTTTCTGCA GTGCCTGGGC
GCGGCCGTGC GCACCCTGGG GGTGGGGCCG TCGCAAGGCG CCGGCGAGTT GTCCCAGGCC
CTGCATGCGC TGGCCGGCGA GGGCCGCTCC TTTGCGCTGT TCATCGATGA TTTCGAGGTG
CTGCACAACG ATGCCGTGCT CGGCCTGGTG CGCCAGCTCA TGGAGCAGCT GCCCGAGCGC
GGGCGCCTGG TCATAGGCTC GCGCGCGCTA CCGGCCCTGG GACTGGGGCG GCTGCGCACC
AGTGGCCAGT TGCTGGAGAT CGATGCGGCG CTGCTGCGCT TTTCCGTGGG CGAGGCCGAG
GAGTTCTTTC GCCTGCGCGG CTGCCCGCTG CCGCGCGAGG CCCTGGCGCG GCTGCTGGAC
AAGACCGAAG GCTGGATAGG CGCGCTGTGG CTGGCCTCGC TGGCGCTGGA GCGCCATGGC
CCGCACAGCG ATTTCATCGA GCGTTTCTCG GGCTCGGAGC GCGCCGTGGC CGACTACCTG
GCCGAGGATG TGCTGGCCCA GCAGCCCGCG TCCGTGCGCG ACTTCCTGCT GCGCACCAGC
ATCCTGCGCA CGCTGGATGC CCAGGTCTGC CAGGCCCTGG TGCCGCGCGC CGACGGCGCC
GCCATGCTGC AGGCGCTGGA GCAGGCCCAC CTGTTCCTGG TGCCGCTGGC CGACGAGGCG
CAGGGTGGCC AGGGCGGGCA CAGCTGGCGC TACCACAGCA TGTTTGCCGA CTTCCTGCGC
GCACAGCTGC TGCGCGAGCA GCCCGGTGAA TTGACGCGCC TTCACCTGGC GGCCAGCGGC
TGGTACGAAT CCTGCGGCCG GCCCGTGCCC GCCATCGAGC ATGCGCTGGA AGGCGGCGAC
CTGCCGCATG CCCTGTCCCT GCTGGCGCGC CATGCCGAGG CGCTGATGGA GCAGGGCCGC
ATGCGCCTGC TGTCGCGCTG GTTCTCGGCC ATGCCGGCAC CGCTGATGGC GCGCGAGCCG
CTGCTGCAGG CCGTGGCCGC CTATGCCGAC TGCTTCACGC GCGGCCCCTG GCAGGCGCAG
CAGCGGCTGG ACGCCTTGCG GCCCCGCATG GCCGCAGACC CCGCCGCGCA GGCGCTGGTC
ATGGCCCTGC AGCCGCTGCT GCTGGCCATG ATGGACCGCG TGGAAGAGGC GGCGCCCCTG
GGCCGCCAGG CGCTGGCCTG CCTGCCCAGC TGCCGGCCGT TTGCAGACAG CTCGCTGACC
AATGCCATGG CCTACGTGGT GTCGGTGCTG GGCGATGCCG AGGAGGCCCA CCGCCTGCTG
GACGCGGCGC GCAGCACCCA GGCCGGCAGC CTGTTCAGCC GCATGTACAC CGAGGCCATG
GAGGGCGTGC TGGACCTGTC GGGCGGGCGG CTGCGGCAGG CGGCATCGCG CTTTCGCGTG
GCGCTGGCCG CCACACCGCG CAGCGCCTCC TACAACCCCA CCAACGGCAA TGCCTGGGCC
GGCGTGCTGC ATGCCGGCGT GCTCTACGAG ACCAACGACC TCGACGGCGC CGACCACCTG
CTCAACGTCT ACCTGCCGCT GGCCCGCGAC GTGGGCCTGC CCGACCATGT GATCTCCAGC
TACCGCATGC GTGCGCGCAT TGCCTTCGTG CGCGGCGATG TGGATGCGGC CTTCGGCCTG
CTGACCGAAC TGGAGTACCT GGGGCATGAA CGCCAGCTGC CCCGCGTGAC GGCCAGCGCG
CGGCTGGAGC ATGCGCGCAT CTTCGTGCTG CAGGGCAACC GGGCCGCCGC GTCCGAGGCG
CTGGAGCGTG CCGACGATCC CGGCGTATGG CCGCGCGTGG AACGCCTGCG CCTGCCGCCG
CACGAGGTGG AGGACATCGC CATCGCCCGG CTGCGCTGGG GGCTGCACTT TGGCGACTGC
CGTGCCGTGC GCGATGCCAT CGCCCCCTTG CTGGCCGATG CGCAACTGCG CGGGCGCCGC
CACCGCAGCC TCAAGCTGCA GGTGCTGTGC GCGCTGGCCG AGGCGGGCTG CGGCGACATG
GACGCCGCAG CCGCCATGCT GGCCCAGCCG CTGCGCCACG GTGCCAGCGA AGGCTTTGTG
CGCCTGATGC TCGATGAGGG GCCGCTGCTC GCGCCCGTGC TGCAGCGCGT GCTGTCGCCT
TCACTGTCGC TTTCACAGAC GCCTTCACTG ACGCGCCGCA CCGAAGCGGC GGAGCCGGAG
GCGGCCGCCC ATGCGCAGCG GCTGCTGTCT GCCCTGGGCG AGCCTGCCGA GCCCGCCGAT
CCCCCCGAGC TGCAGGCAGC GGATGCGCCC CAGGGCCCGG TGCCGGCCAC GGCGCTTGCC
GAGCCCCTGA CCCGCAAGGA GCTGCGCGTG CTGGAGCTGC TGGCCTCGGG CTACTCCAAT
GCGGCCATGG CCGAGAAGCT CTTCGTCTCG GACAGCACGG TGCGCACCCA CCTGCGCAGC
ATCAACCTCA AGCTGGGCGC GCGCAGCCGC ACCCAGGCCG TGGCGCTGGC GCGGGAGCTG
CGGGTTCTGC GCTAG
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| Protein sequence | MQPPAPTPSS GPGPGSGYVP QAKLSPPRAA AAQVARLAVA ARWPEALRAR VVLVRAPAGF
GKTTAMRQMR ERLQAEGQAT AWLTLDAADN DVSRFLQCLG AAVRTLGVGP SQGAGELSQA
LHALAGEGRS FALFIDDFEV LHNDAVLGLV RQLMEQLPER GRLVIGSRAL PALGLGRLRT
SGQLLEIDAA LLRFSVGEAE EFFRLRGCPL PREALARLLD KTEGWIGALW LASLALERHG
PHSDFIERFS GSERAVADYL AEDVLAQQPA SVRDFLLRTS ILRTLDAQVC QALVPRADGA
AMLQALEQAH LFLVPLADEA QGGQGGHSWR YHSMFADFLR AQLLREQPGE LTRLHLAASG
WYESCGRPVP AIEHALEGGD LPHALSLLAR HAEALMEQGR MRLLSRWFSA MPAPLMAREP
LLQAVAAYAD CFTRGPWQAQ QRLDALRPRM AADPAAQALV MALQPLLLAM MDRVEEAAPL
GRQALACLPS CRPFADSSLT NAMAYVVSVL GDAEEAHRLL DAARSTQAGS LFSRMYTEAM
EGVLDLSGGR LRQAASRFRV ALAATPRSAS YNPTNGNAWA GVLHAGVLYE TNDLDGADHL
LNVYLPLARD VGLPDHVISS YRMRARIAFV RGDVDAAFGL LTELEYLGHE RQLPRVTASA
RLEHARIFVL QGNRAAASEA LERADDPGVW PRVERLRLPP HEVEDIAIAR LRWGLHFGDC
RAVRDAIAPL LADAQLRGRR HRSLKLQVLC ALAEAGCGDM DAAAAMLAQP LRHGASEGFV
RLMLDEGPLL APVLQRVLSP SLSLSQTPSL TRRTEAAEPE AAAHAQRLLS ALGEPAEPAD
PPELQAADAP QGPVPATALA EPLTRKELRV LELLASGYSN AAMAEKLFVS DSTVRTHLRS
INLKLGARSR TQAVALAREL RVLR
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