More than 300 homologs were found in PanDaTox collection
for query gene Namu_1210 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  100 
 
 
198 aa  390  1e-108  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  73.23 
 
 
198 aa  271  6e-72  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  73.23 
 
 
198 aa  270  1e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  50.99 
 
 
203 aa  178  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_009664  Krad_0739  two component transcriptional regulator, LuxR family  49.01 
 
 
204 aa  163  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.297506  normal  0.226729 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  44.95 
 
 
199 aa  154  7e-37  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  43.1 
 
 
253 aa  152  2e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  43.24 
 
 
223 aa  147  8e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  36.2 
 
 
224 aa  126  2.0000000000000002e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013947  Snas_1088  transcriptional regulator, LuxR family  41.63 
 
 
207 aa  125  4.0000000000000003e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  36.19 
 
 
218 aa  118  7e-26  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  38.05 
 
 
212 aa  116  3e-25  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  35.55 
 
 
230 aa  113  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.68 
 
 
221 aa  110  2.0000000000000002e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  35.44 
 
 
207 aa  109  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  36.77 
 
 
226 aa  108  5e-23  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  39.23 
 
 
216 aa  108  6e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.32 
 
 
226 aa  108  6e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  35.98 
 
 
225 aa  107  8.000000000000001e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  82.26 
 
 
268 aa  107  1e-22  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  36.32 
 
 
222 aa  106  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  36.36 
 
 
226 aa  106  2e-22  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_013235  Namu_4745  two component transcriptional regulator, LuxR family  41.79 
 
 
209 aa  106  2e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  82.26 
 
 
270 aa  106  2e-22  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  36.79 
 
 
221 aa  107  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  37.5 
 
 
213 aa  105  4e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  31.13 
 
 
218 aa  105  5e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  36.15 
 
 
219 aa  104  1e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  34.26 
 
 
220 aa  102  3e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  35.75 
 
 
210 aa  102  4e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013131  Caci_0637  two component transcriptional regulator, LuxR family  34.09 
 
 
229 aa  102  4e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565019 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  35.81 
 
 
225 aa  99.8  2e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  33.64 
 
 
231 aa  100  2e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  36.41 
 
 
216 aa  100  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  33.49 
 
 
228 aa  100  2e-20  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  37.44 
 
 
214 aa  99.8  2e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  33.66 
 
 
209 aa  100  2e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.88 
 
 
225 aa  100  2e-20  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013441  Gbro_4528  response regulator receiver  33.65 
 
 
213 aa  99.4  3e-20  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  32.7 
 
 
220 aa  99  4e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  27.54 
 
 
207 aa  98.6  5e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  27.54 
 
 
207 aa  98.6  5e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  29.63 
 
 
220 aa  98.2  6e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  34.83 
 
 
207 aa  98.2  7e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  32.37 
 
 
207 aa  98.2  7e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  32.86 
 
 
221 aa  98.2  7e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_012803  Mlut_02970  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.18 
 
 
227 aa  98.2  7e-20  Micrococcus luteus NCTC 2665  Bacteria  normal  0.611463  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  32.83 
 
 
209 aa  97.8  8e-20  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  34.65 
 
 
217 aa  97.8  8e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  33.94 
 
 
227 aa  98.2  8e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  34.27 
 
 
224 aa  97.8  9e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  32.72 
 
 
241 aa  97.4  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  35.71 
 
 
206 aa  97.1  1e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  35.14 
 
 
218 aa  96.7  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  32.54 
 
 
210 aa  97.1  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  35.27 
 
 
242 aa  97.1  2e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.8 
 
 
239 aa  96.7  2e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  32.72 
 
 
224 aa  97.1  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  36.54 
 
 
214 aa  95.9  3e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  34.08 
 
 
216 aa  96.3  3e-19  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  31.6 
 
 
218 aa  95.9  3e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  35.94 
 
 
227 aa  95.9  3e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  26.54 
 
 
218 aa  96.3  3e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1616  response regulator receiver  27.94 
 
 
210 aa  95.9  3e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  0.869432  normal 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  34.84 
 
 
230 aa  96.3  3e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  32.88 
 
 
225 aa  96.3  3e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  33.18 
 
 
221 aa  95.9  3e-19  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  36.02 
 
 
216 aa  96.3  3e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  34.56 
 
 
223 aa  95.5  4e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  35.09 
 
 
239 aa  95.9  4e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  34.6 
 
 
220 aa  95.5  5e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  33.97 
 
 
211 aa  95.5  5e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  33.8 
 
 
221 aa  95.1  6e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  34.26 
 
 
226 aa  95.1  6e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  34.23 
 
 
227 aa  95.1  6e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  36.32 
 
 
201 aa  94.7  7e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  29.59 
 
 
208 aa  94.7  7e-19  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  28.99 
 
 
207 aa  94.7  8e-19  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  30.99 
 
 
303 aa  94.7  8e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_013235  Namu_0487  two component transcriptional regulator, LuxR family  32.52 
 
 
215 aa  94.7  8e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  28.37 
 
 
228 aa  94.7  8e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5412  transcriptional regulator, LuxR family  68.18 
 
 
155 aa  94.4  9e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.207706  normal  0.221863 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  33.33 
 
 
217 aa  94  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  32.7 
 
 
214 aa  94  1e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  34.58 
 
 
254 aa  94  1e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  26.7 
 
 
211 aa  94  1e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  33.82 
 
 
212 aa  94.4  1e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  32.39 
 
 
219 aa  94.4  1e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  28.16 
 
 
213 aa  94.4  1e-18  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6284  two component transcriptional regulator, LuxR family  31.6 
 
 
217 aa  94.4  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  29.52 
 
 
216 aa  94  1e-18  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  33.98 
 
 
211 aa  94  1e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.7 
 
 
230 aa  94  1e-18  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  32.37 
 
 
208 aa  94.4  1e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  30.69 
 
 
230 aa  93.6  2e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  35.48 
 
 
221 aa  93.2  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  33.81 
 
 
217 aa  93.6  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  37.02 
 
 
236 aa  93.6  2e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  30.69 
 
 
213 aa  93.2  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  32.55 
 
 
239 aa  93.2  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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