| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4706 |
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| Symbol | |
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| ID | 3714622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5310534 |
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| End bp | 5313269 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_350434 |
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| Protein GI | 77460927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.157543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TGTCCCCACT TCCGGGTCCC GCAAGCGTTG CCGTCGCGGC ACTGGACGGG
CGTTTTTTTC GCCCGCCACT GCCTGACGGC TACGTCATGC GGCCACGACT GTGCGAGCGC
CTGCAAGCCG GGCTCGGTGG ACGTCTGTTG CTGGTCAGCG CCCCGGCCGG GTTCGGCAAA
AGCTCGCTGG CCGTGGAGTT CTGTCAAAGC CTGCCGGCGA ACTGGCACAG CCTGTGGCTG
GGGTTGAGCC CGCGGGACAA CGACCCGGGG CGTTTTCTCG AGCGTCTGCT CGAAGGTTTG
CAGGATTACT TTCCGCAACT GGGCAGTCGG GCACTGGGGC TGCTGAAAAT GCGCCAGCGT
CATCAGCCGT TCGCCTTCGA GGAATGGCTC GACGGCCTGC TCGATGAGCT GGCTCAGCAT
CTCGAACCGT GCTCACCCCT GTTGCTGGTG CTGGACGACT ATCACCTCGC ACAAGGGCCG
GTACTCGACC GTTGCCTGCA ATTTTTCCTC AACCATTTGC CCGACGGTCT GCTGGTCATG
GTCACCAGTC GGCAACGGCC GGACTGGCAC CTGGCTCGCC TGCGCCTGTC GCGGCAATTG
CTGGAACTGC ACGAACAGGA CCTTCGCCTG ACCCACGACG AAGCCTCGGC ATTACTCGAC
CGGCACCGTA GCTCCCTTCG TGGCGAGGCG CTGGAAAACC TGATACAGCG CAGTGAAGGC
TGGGTCGCCG GCCTGCGATT CTGGCTGCTG GCCGAGTCCG AAGCCGGAGG GGACTCGGTG
TTGCCTCAGG CGCTGAATGG CGGGGAAGGG CTGATCCGCG ATTACCTGCT GGAGGAAGTC
ATCGATTGCC TGCCAGCCGA AGTGCAGGCG TTTCTCTACG ACACCGCGCC GCAGGAGCGT
TTTTGCAGCG AGCTGTGCGA CGCTGTGCGC GAAGCCCATG ACAGTGCTGA AATCCTGCGT
TTCCTGCTGG CGCATCAGGT GTTTCTGGTG CCCCTGGACG AGCACGGGCA CTGGTATCGC
TATCACCATC TGTTTTCCGA TCTGTTGCGC AGTCGTCCGA TCACCGGGGC GATAGTCCCG
GCTGCCACGC TGCACTTGCG CGCCTGTCGC TGGTTCAATG CGCAGGGGCT GCTGGATGAA
GCCGTGGAGC AGGCCTTGCG CGCAGGGCAT CTGGACGTGG CGGCGAATCT GGTACAGAAC
CTGTCCGAAG AACAACTGCT GGCCGAGCAG AACGTCGGTA TGCTACTGCG ATGGAAAATG
GACTTGCCTG ACAGCCTGCT GATCAGCACC CCGCGCCTGA TCGTGCTGTA CAGCTGGGCG
TTGGGATTGG CGTGTCAGCT CGATGCTGCC GAAGAACTTG CCAGTCATCT GAGCCGGTTT
CTGCCGGCAC CCTCAGCGAC AGCGCAGAAG TCGATGCTTG CCCAATGGCT GGCGCTGAAG
GGGATCATCG CCCGTGGGCG AGGGCACCGC CAGCAGACCA TCGAGTATTG CAGTGAAGCG
CTGGAAAGCT TGCCGGCCAA GCGTTACGGC CAGCGTCTGA TGTGCCTTTC CACTTTATCC
AACCTGGCGA TCGCCGACGG CGATCTGTGG CGTGCCCGAG GCTTGAACCG CGAATCCCTG
GAACTGGCGC AGCGGGTCGG CAATCCGCTG TTCGAGGCGT TGGCACATTA CGATCGCGCC
CGCGTCCTGC AGGCTCGCGG CGAGATTATG CGTGCGCTCG ATGAAGTGCG TCAGGGACTG
GACCGTCTGC GCGGACTGTC GGCACAACGC TTGTACGCAG TCCGTGCCCG GCTGACGCTG
TATGAAGGTT TCCTGCTGGC CATGCGTCTG CAGCCACAAG TGGCACGGGC GCGATTGCAG
GCTGGCTTGA GCGAGGCACG GGCCTGTCGT GATATCAGCG TATTGATCGG CCACTGCGTG
ATCGCCCGGC TCGAGGGCAG CAGTGGTGAT TTTGCCAAGG CCTTCGCCGA GCTGGCAGAA
GCCGAACGCC TGATGCACAT CTGGGACGTT CCACCGATCT ACTATCTGGC GATGATCACG
CTGGTCAAAT GCGAACTGTG GCTGTCCCAG GGGCGCATTG ATCTGGCCGA GGCCTGGCTG
GCGCGGTTGG GTCAGACCTA TACCGGCGAG CGCGCGGCCG CGCCGCCGGA GTTCCACCCT
CAATTGCCGT TGCACGTCGA ATTGCAGCAG GCGCTGCTGG ATGTCATTCA GGGACAACCC
ATGCTCGCCG AAGGGCGATT GAATGTCTTG CTGGAAAACG GTCAGCAAAC CGGACGACAA
CTGCTCAGCG TGATGGCGTT GACGCAAAAG GTTGTGCTTT TACTGGCAGG CGGGCGCGAG
TCCGAGGCTC GCAAGGCTTT GGGGCAGGCG CTGGAGGCGG CTGCTGGCGG TGTGCTGCAA
CCTTTCGAGA TCTTGCTCAA AGAGCATTCG GAGTGGTTGC GCGGGCAATT GCAACTGAAC
GCAGCGACCG CGTTTTGCCA GCAGTTGCTG GAGCACTTTC CACAGGCGAG CGTCCGCTCG
CAAGCGGAAT CCGTTACGAC CGAGCAGCTC AGTTCCCGTG AATTGGCCGT ATTGCGGTTG
ATTGCACAAG GCTGCTCGAA CCAGGAAATC AGCGATCAGC TGTTTATTTC CCTGCATACC
GTGAAGACCC ATGCCAGCCA CATCAACAGC AAACTCGGAG TCGAGCGACG TACACAGGCA
GTGGCGCGCG CCAAGGAGCT GGGGGTCTTG AGTTGA
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| Protein sequence | MTDLSPLPGP ASVAVAALDG RFFRPPLPDG YVMRPRLCER LQAGLGGRLL LVSAPAGFGK
SSLAVEFCQS LPANWHSLWL GLSPRDNDPG RFLERLLEGL QDYFPQLGSR ALGLLKMRQR
HQPFAFEEWL DGLLDELAQH LEPCSPLLLV LDDYHLAQGP VLDRCLQFFL NHLPDGLLVM
VTSRQRPDWH LARLRLSRQL LELHEQDLRL THDEASALLD RHRSSLRGEA LENLIQRSEG
WVAGLRFWLL AESEAGGDSV LPQALNGGEG LIRDYLLEEV IDCLPAEVQA FLYDTAPQER
FCSELCDAVR EAHDSAEILR FLLAHQVFLV PLDEHGHWYR YHHLFSDLLR SRPITGAIVP
AATLHLRACR WFNAQGLLDE AVEQALRAGH LDVAANLVQN LSEEQLLAEQ NVGMLLRWKM
DLPDSLLIST PRLIVLYSWA LGLACQLDAA EELASHLSRF LPAPSATAQK SMLAQWLALK
GIIARGRGHR QQTIEYCSEA LESLPAKRYG QRLMCLSTLS NLAIADGDLW RARGLNRESL
ELAQRVGNPL FEALAHYDRA RVLQARGEIM RALDEVRQGL DRLRGLSAQR LYAVRARLTL
YEGFLLAMRL QPQVARARLQ AGLSEARACR DISVLIGHCV IARLEGSSGD FAKAFAELAE
AERLMHIWDV PPIYYLAMIT LVKCELWLSQ GRIDLAEAWL ARLGQTYTGE RAAAPPEFHP
QLPLHVELQQ ALLDVIQGQP MLAEGRLNVL LENGQQTGRQ LLSVMALTQK VVLLLAGGRE
SEARKALGQA LEAAAGGVLQ PFEILLKEHS EWLRGQLQLN AATAFCQQLL EHFPQASVRS
QAESVTTEQL SSRELAVLRL IAQGCSNQEI SDQLFISLHT VKTHASHINS KLGVERRTQA
VARAKELGVL S
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