| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0745 |
|---|
| Symbol | |
|---|
| ID | 7861843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 823014 |
|---|
| End bp | 825701 |
|---|
| Gene Length | 2688 bp |
|---|
| Protein Length | 895 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864825 |
|---|
| Product | ATP-dependent transcriptional regulator, MalT-like, LuxR family |
|---|
| Protein accession | YP_002880768 |
|---|
| Protein GI | 229819242 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCCC TCGAGTGGCC GGAGGGGTGG GCCGGCCCTA GCGTGCCAGG CGTGACCCTT
CTCGACGTCC CGCGCCCGGT CGTGCCGCGG TACAAGGTCA CGGTGCCTCG CCGCGGCGAG
GCGACGATCG CCCGGCCCCG ACTCTCGGCC ATGCTCGACG ACGCCGTCGC CTCCCGTCCG
GTCTCGCACG TCGCGGCGCC CGCGGGCTTC GGGAAGTCCA CGGCCGCCGC CGCCTGGGCG
GCGGACCGGT CCGACGTCGC GTGGCTGTCG CTCGACCCGT ACGACGCCGA CCCGCGGCGC
CTGTACCGGG GCGTGCTCGC CGCGATCGCC ACTGCCCTCG CCGACGACGA GCTGCCCGCC
CCGCTGGCCG CGGTGCTGCG CCCCGGCGTC CACCCTCGCG ACCCAGAGGA CGCGATCGAC
CTGCTCGACG GCGTGCTCGA GGCGCTCGAC GACCTCCGAC GCCCGCTCGT CCTCGTGGTC
GACGACGTCC ATCACGTCCC GCCTGGTGTC GCGAGACCCG TGGTCCGCGC GGTGCTGAGC
GCGGGCCTAC CGACCACGAA CGTGCTGCTC CTCAGCCGGG ACGCGTCCCA CCTCGACGGG
CTGGACCTGG ACGCCACCGT CACCGGCGCG GACCTCGGGT TCACGGCCGA GGAGATCGTG
ACGCTGTCCG GGTCCTACCC CCCGGGTCTC ACGCAGGCGC AGGCTGTCTC GCTGCACGAC
GAGACGCGTG GCTGGCCAGC GGCGGTCCGG ATGTCGCTGA TCGATCGACC TGACCGGGAC
GCCGCGGAAC GTCGCGGCAC CCCGGCCACC CCGGCCACGA CCCCCGCCCG CGCCGTCGCC
GCACACGACG AGGCGTTCGG CGCCTACCTG CACGACGAGG TGCTCGGTGC GCTCCCGCGG
GCGGTCGCCG CCTTCGTGCG CCGGGCGACC ACGAGCACCG TCATCACCGC CTCCCTCGCC
ATCGCTCTGA CGGGCGACGA CGGCGCGCGG CTCCTCGCCG CCACGCTCCG CCGCGGACTG
TTCCTCACGC CCCTCGGGCG GCGCGACGGC GAGGACGTGT ACCGCTGGCA CGACCTGTTC
GCCTCCTGGT GCCGCAGCCG CCTCGAGCAC GAGGACCCGG CACTGGCCCG GGACCTGCAC
GGGCGCGCCG CGCGATTCTG GGGAGCGCGC CATCTGCCCG AGTCCGTGCC GCACGCACTC
GCCGCCGGAG ACAGCGGTGC TGCGGTCGAC CTGCTCGTCG AGGGCGCGCT CGAGGCGCTG
CTGAACGGCG GGGCGGCCGA GCTGCTCGAG CTGTGCGAGG CCCTCCCGCC CACGGCGCGG
GACGACGCGC GCGTCGTCGC GATCCGGTCG GTCGCCGCGC GCATGTCCGG TCGACGTGAC
GAGGCCGCGT CGCTCCTCGA GCGCGCCCGC GCGCAGCTGG CTGACCACGA CGCGGGCGAC
GCCGACGGCT CCCACGCGCT CGCCGTCGCG ATGCTCGAGA CGTTCGTCGC GGGTCCGTCG
TCGGCTCCCG ACGCCGCGGA ACGGCTCCTC GCGTCGCCGG CGGCGCTGCA CCCCGCCGTC
CGGGCCGGCC TGCTGTACCA CCTCGGACGG CGGGCCACCC GCCGCCAGCA GGATCCCCGG
GGAGCGCTCC ACCTGCTGGA CGAGGCGGTC TCTCTCGCGG AGCGCCACGG ACTCGACGGC
GTCGCACTCG CGAGCCGGGC CGAACGGGCC TCCGCGTTGG TGGATGCCGC CGAACCGGTG
CTCGCCGAGC AGGCGATCAC CGACGTCCTC GAGCGGGCGG AGATCTCGGG GTGGGCGCAG
GACGCCCGTC TGGCGCTGCT CCGGCTCGAG GCCGGCGTCT TCGCGTACTG GCGGGACGAG
TTCGACGTCG CGCAGCGGCA CTTCACGCTC GTCACGCGCG CCCGGGGTGA CGACGAGGCG
GTCGCGAGCC TCGGCTCGCT GTACGGAGCC CTCGCGTCGA TCGCGACAGG GGACGCGGGC
GGCGCGGCGG CCGCCGCGCA GGGGATCAGT CAGGGCCTGG CGAGCCTGCC GCTCGAGGCC
ATGCATGCCC TGCTCCGCCT GAAGACCGCG GAAGCGGCCG GCGACGTCGC CTCCGCCGTC
CGCGAGGCGG ATCTGATCGG ACGCTCGCCG TGCATGCCCT TCGCCGTGGT GTGGCAGGCC
GAGGTCTTCC GGGTGGCCGG CCGGGCGGAG CGGGCGAGGA ACGTCCTGGC CAGCCTGCGG
GCCGTTCCCG TGCGGGCACA CGTCCGCGTC GCGGCCGAGC TCACCGGCGC GTTGCTCGAC
GCCGCCGACG GCGGGGACCC GCTGCCGCAG ATCGTCGCCG GCCTCCACGT GGCGGCGCCG
TCCCGGTTCA CGCGCCCGTA CCTCGAGCGG CTGCCCGACC TGCGCCCGTA CCTGGAGGCG
CTCGTCCACG CCGGCACGGA CCATCGGGAC TTCCTCACCG GCCTCCTGGG CACCCCCGCC
GCGGACGGCG CTCCGCACCG CCGGTCCCAC TGGGAGCTCA CGGACCGGGA GCTGGAGATC
CTCGACGGCC TGCGGTCGTC CCTGACCGCG GCGGAGATCG CTCGCTCCCT GTTCGTGAGC
GTCAACACCG TGAAGACGCA CCAGCGCGCC GTCTACCGCA AGCTCGGGGC GCGCAACCGC
CGGGAGGCGG TCCGTCTCGC GGCGAGCCGC GGGTTCCTGC CGGCCTGA
|
|---|
| Protein sequence | MDALEWPEGW AGPSVPGVTL LDVPRPVVPR YKVTVPRRGE ATIARPRLSA MLDDAVASRP
VSHVAAPAGF GKSTAAAAWA ADRSDVAWLS LDPYDADPRR LYRGVLAAIA TALADDELPA
PLAAVLRPGV HPRDPEDAID LLDGVLEALD DLRRPLVLVV DDVHHVPPGV ARPVVRAVLS
AGLPTTNVLL LSRDASHLDG LDLDATVTGA DLGFTAEEIV TLSGSYPPGL TQAQAVSLHD
ETRGWPAAVR MSLIDRPDRD AAERRGTPAT PATTPARAVA AHDEAFGAYL HDEVLGALPR
AVAAFVRRAT TSTVITASLA IALTGDDGAR LLAATLRRGL FLTPLGRRDG EDVYRWHDLF
ASWCRSRLEH EDPALARDLH GRAARFWGAR HLPESVPHAL AAGDSGAAVD LLVEGALEAL
LNGGAAELLE LCEALPPTAR DDARVVAIRS VAARMSGRRD EAASLLERAR AQLADHDAGD
ADGSHALAVA MLETFVAGPS SAPDAAERLL ASPAALHPAV RAGLLYHLGR RATRRQQDPR
GALHLLDEAV SLAERHGLDG VALASRAERA SALVDAAEPV LAEQAITDVL ERAEISGWAQ
DARLALLRLE AGVFAYWRDE FDVAQRHFTL VTRARGDDEA VASLGSLYGA LASIATGDAG
GAAAAAQGIS QGLASLPLEA MHALLRLKTA EAAGDVASAV READLIGRSP CMPFAVVWQA
EVFRVAGRAE RARNVLASLR AVPVRAHVRV AAELTGALLD AADGGDPLPQ IVAGLHVAAP
SRFTRPYLER LPDLRPYLEA LVHAGTDHRD FLTGLLGTPA ADGAPHRRSH WELTDRELEI
LDGLRSSLTA AEIARSLFVS VNTVKTHQRA VYRKLGARNR REAVRLAASR GFLPA
|
|---|
| |