| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_04700 |
|---|
| Symbol | |
|---|
| ID | 8385808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 461660 |
|---|
| End bp | 462256 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644974568 |
|---|
| Product | response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein |
|---|
| Protein accession | YP_003132372 |
|---|
| Protein GI | 257054540 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.162406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGG TCTTGATCTG CGACGACCGA CGCAGTGTTC GCGAAGGGCT TACCCGCGTG
ATGTCCGCTG TTCCCGGCGT CAGTCGCATC GACTGCGTAG CGCACGGTGA CGAGTTGCTT
GCCCGGTATT CCCGGCAGCC GGTCGATGTC GTGCTCGTGG GTACGCAGCG TGCTGTGCCG
ACCGGTGTGG AGGCCACCCG GCGCCTGGTC TCGGCGAACC CCCAGGCGAA CGTGATCGTG
TTCGGCGCCC CTGACGACGC GGGTAGCATC GCCGCGGCTA TCGCCGGTGG AGCCCGGGGA
TACCTGAGGT GGGACGCCTC CCGTCCGGAG CTCGTCGCAG CACTTGCGCA CACACTCGCC
AGCACGTCCG TACCGGCACC TCGGCAACCG TCCGATCCCG GAGTCCAGCT CACCGAGCGG
GAACTTCAGG TACTGCGTGG AATGAGTCAG GGCAAGAGCA ACGGTCAGAT CGGCCGAGAG
CTGTATCTGT CCGAGGACAC GGTGAAGACC CACGCTCGCC GGCTGTTCCG CAAGCTCGGT
GTGCGGGACC GTGCCCAGGC CGTGGCGCAC GGTTTCCGAC GCGGTCTCGT CGCCTGA
|
|---|
| Protein sequence | MTTVLICDDR RSVREGLTRV MSAVPGVSRI DCVAHGDELL ARYSRQPVDV VLVGTQRAVP
TGVEATRRLV SANPQANVIV FGAPDDAGSI AAAIAGGARG YLRWDASRPE LVAALAHTLA
STSVPAPRQP SDPGVQLTER ELQVLRGMSQ GKSNGQIGRE LYLSEDTVKT HARRLFRKLG
VRDRAQAVAH GFRRGLVA
|
|---|
| |