| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5188 |
|---|
| Symbol | |
|---|
| ID | 8450819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5780153 |
|---|
| End bp | 5782807 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645044221 |
|---|
| Product | ATP-dependent transcriptional regulator, MalT- like, LuxR family |
|---|
| Protein accession | YP_003204445 |
|---|
| Protein GI | 258655289 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTGCTC CGGCGCGTGA GCTGGTCACG CTGCGCACCC GTCCCCCGTC GACCCTGCCG
GCGGGGGTCC GTCGCCGACG GCTCGAGACG GCGCTGGACC GGTCGTTCGA CCGCGTGTTG
ACCTTGGTCA GCGCGGGTCC CGGCTTCGGC AAGACGGTGA CCGTGGCGTC CTGGGTGCAG
CTGCGCCAGA TCGACCACTG CTTCGCCTGG CTGACCCTGG ACCATTTCGC CGACTCCGTG
CACGGGTTCT GGTCCGACGT GCTGGCCGCG ATCCGGTTCA GCGACGCGGT GCCGGCGGAC
AGCCCGCTGC ATGAGATCAG CCCGGCCAGC TCGTTCGGCT CACGGGAGGT CGACAGCCTG
CTGGCCCAGC TGGCCGACCT GCGCCGGCCG GTGGTCCTGG TGCTGGACGA CTTCCACCTG
ATTCGCAACC CCGAGGTGCT CGAGTCGATC GCGACCCTGC TGGACCGGCA ACCGTCCAAG
CTCCGGTTGG TGCTGACCAC CCGCGCCGAT CCGGTGCTGC CGCTGCACCG GTTGCGGGTG
GCCGGCCAGT TGACCGAGAT CCGCAGCCGC GACCTGGCCT TCACCCTCGA GGAGTCGGCC
GATCTGTTCG TGCTGGAGGG CTTCGCGCTG ACGGCCGAGC AGCTGGACGA TCTGTACCGG
CGCACCCAGG GCTGGCCGGC CGGGCTGCGG CTGGCGGCCA TGACGCTGGA TCGGGCCGAC
CTGGCGGCCA GCATCAACCG GGTCACCGGC AGCGACCGGG CGATCGCCGA ATACCTGGTC
GGGGAGGTCC TGGACCGCTC GGAGCCGGCC GACCGTGAGT TCCTGCTGCG CACCAGCATC
GTCGACCGGT TGTGCGCCGA CCTGGCCGAC CGGTTGACCG GCCGCGACGA CGGCCAGCAG
GCGCTCGGCC GGCTGCTGCG GTCCAACGCC CTGGTCACCG CCCTGGACGA TCGTGATCAG
TGGGTCAGCT ATCACCCGCT GCTACGCGAA CTGCTGCGGC ACCGGCTGCT GCTCGAGCAC
CGGGCGATCG TGCCGGAGCT CCAGCGCCGG GCCGCGGCCT GGTTCGTCGA GCGCGGCGAT
CCGATCGAAT CCCTGCGCCA CTCGATTCGG GCCCAGGACT GGGACGGGGC CGGCCGCACG
CTGATGCTCT GCATCCCCAA GATTCTCTCG GTCGAGGCGC CCATCCTGGC CGCCGCGATC
CGGCCGCTGG CCGACCGGGC GGTCACCCAC CCGGGTCTGT TCCCGCTGCT CGCGGCGGCC
GCCTCGCACC TGCAACAGCA GGACTACGCG GCCGTGCACC AGAACATCGT GGACGCACGC
CAGTACGTGG ACTCCGCGCC GGACGAGCTG CGGCCGTTGA TCACGGTGCT GCTCGAACTG
TTCGAGATCG CCTACTGCCG GCTGGTAGGC GACGCGACCG GGCTGGCCAA CCAGTGCGAC
AAGGTGCTGC GGCTGGTCGA CGAGATTCCG CGGCGGGACC TGCCGCTGGC CCCGCACTTC
CGGGCCATCG CCACCGCGAA CCTGGGGGCG GCCCAGCTGT GGACCGACGA CCTGGGCGCG
GCCGAACTGA CCTTCGCCGA CGGCGACCGC CAGCTGAACG ACCTGGGCCT GGAGTTGACC
CTGCTCAACA CGGTCTCGTT CCAGTCGGTG ATGGAGGCGA TGACCGGGCG GTGCCGGCGG
GCCGAACGGC GGGCCCGGCA GGCGCTGGCC CTGGTCGACC GGCGTGGCTG GGGATCGGAG
ACCCAGTCAT TCGCGCTGCA CCTGGCCCTG GGCATGGTGC TCAACGCCCG CGGCCAGGCC
GACGAGGCCA TGCGGGCCTT CGGCCGAGGC TTGAGCGTGA GCCGCACACA GAGCGACCGG
ATGGTCCGGC TGGGCCTGGC CGTCGGCGCG GTGGAGGCCG CCGTGCTGCG CTCGGACGTG
GCCGGGGCGA TGGAGGCCGA CGCCCGGGCC CGGGCCGGCC TGGCCCGCAC GCCCGGGACG
CCCATCCGGA TGCGCTGCTG GGCCGACGTG GCCGGGGCGC AGACCCTCAT CGCCGCCGGG
CTCCCGCAGG AGGCGATCGA ACGGCTGGGC GAGCCGGCCG ACGACCGCGG CTTCTCCGCC
GTCTGGCAGC GGGCCTGGCT GGCCCGGGCC CACCTGGAAC TGGGCGCCCT GCACCGGGTG
GAAGAGCTGG TCCGGCCGGT CATCGAGCCC GGCTGGCAGT ACCGGGAACC GGTCATCCTG
GCCCGGCTGC TGCTGGCCAT CGCGGCCGAG AAGCAACACC GGGACGGGTT GGCCCTGACC
CACTTCACCG CCGCGGTCGA GTTGGCCCAG CCCGAGGGGA TCCGGCGCCC TTTTCTGCAG
CTGGCCAGCC GGCTGGCCGG GCCCCTGCAC CGCTATCAGG TGCTCGACGG ACCGAACACC
GCGTTCGTGG TCGAGTGCAT CGGCGCGGCC CCAGCCGACG CGCACAGCCC GGCCGGGCAG
GTCGAGCACC TGACCGAACG CGAACTGATC GTGCTCAAGT ACCTGCCGAC GATGCTGAAG
GCCGGGGAGA TCGCCGACGA TCTTTTCGTG TCGGTCAACA CGGTCAAGGC CCATCTGCGG
TCCATGTATC GCAAGCTGGG GGTCAGCAAC CGCCGGGAGG CGGTGGAACG CGCCCGGTCC
CAAGGGCTGT TGTAG
|
|---|
| Protein sequence | MTAPARELVT LRTRPPSTLP AGVRRRRLET ALDRSFDRVL TLVSAGPGFG KTVTVASWVQ
LRQIDHCFAW LTLDHFADSV HGFWSDVLAA IRFSDAVPAD SPLHEISPAS SFGSREVDSL
LAQLADLRRP VVLVLDDFHL IRNPEVLESI ATLLDRQPSK LRLVLTTRAD PVLPLHRLRV
AGQLTEIRSR DLAFTLEESA DLFVLEGFAL TAEQLDDLYR RTQGWPAGLR LAAMTLDRAD
LAASINRVTG SDRAIAEYLV GEVLDRSEPA DREFLLRTSI VDRLCADLAD RLTGRDDGQQ
ALGRLLRSNA LVTALDDRDQ WVSYHPLLRE LLRHRLLLEH RAIVPELQRR AAAWFVERGD
PIESLRHSIR AQDWDGAGRT LMLCIPKILS VEAPILAAAI RPLADRAVTH PGLFPLLAAA
ASHLQQQDYA AVHQNIVDAR QYVDSAPDEL RPLITVLLEL FEIAYCRLVG DATGLANQCD
KVLRLVDEIP RRDLPLAPHF RAIATANLGA AQLWTDDLGA AELTFADGDR QLNDLGLELT
LLNTVSFQSV MEAMTGRCRR AERRARQALA LVDRRGWGSE TQSFALHLAL GMVLNARGQA
DEAMRAFGRG LSVSRTQSDR MVRLGLAVGA VEAAVLRSDV AGAMEADARA RAGLARTPGT
PIRMRCWADV AGAQTLIAAG LPQEAIERLG EPADDRGFSA VWQRAWLARA HLELGALHRV
EELVRPVIEP GWQYREPVIL ARLLLAIAAE KQHRDGLALT HFTAAVELAQ PEGIRRPFLQ
LASRLAGPLH RYQVLDGPNT AFVVECIGAA PADAHSPAGQ VEHLTERELI VLKYLPTMLK
AGEIADDLFV SVNTVKAHLR SMYRKLGVSN RREAVERARS QGLL
|
|---|
| |