| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3839 |
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| Symbol | |
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| ID | 5060317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4398598 |
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| End bp | 4399404 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640476096 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001160647 |
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| Protein GI | 145596350 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTACGG TTCTCGTGTG CGTTCGAACG CCCTTGGCGG CGCAGCACCT GACCTCCGCC
GCGGCGCGGC TGGGGCTATC TGGGGCGGTG CGGACCGCCG TCTCCGACCC TGAGGTGATG
CTGCGGCTCG CCGAACGCCC CGCCGACGTG GTGCTTGTTG ATACGGCGCT GACCCGGCCG
GACAGCGCGG GGTTCGTCCG CCGGGTCCTG GCCCGGGCGC CGCAGGCGGC CGTGGTGTTG
CTGGGGGTCG AGGAGTCCGA GTCGGCGGCG GCGACGATCA GCGCGGGAGC CCGGGGGCTG
ATCCAGGGCG CCGACCACGA TCTCACCAGC TCGGTGGCGA AGGCGCTGCT GCTGCTCTCC
GCCCCCGGGC GGGCCAACCG TCATCGGGTC GACCCGGCGC GGGATGCGGC CTCGGTGGGC
GGGTCGGTCC GCGCTACTCC CGGCGGCCGG GCTCCCGCCG ACCCACCGTC GGGTTGGCCG
GCCGGAGCCG CCGAAGGGGC CGGTGGGGCG CCAACGGTGG TGCCGGCGCA GCGCGGCGAC
GACCCCGCTG ACCCGGCGGG TGAGCTTGCC GCGGTGCCCG CCGGCGGCCC AGCTCGGGAG
CCACGGCCAG CGGTCGGGCT GACCGAGCGG GAGCTACAGG TGCTCCTGGG CATGGCCGAG
GGCAAGAGCA ACGCCGAGAT CGGCCGGGAG CTGTTCGTCT CCGAGGACAC GGTGAAGACC
CACGCCCGAC GACTCTTCCG CAAGCTCGGT GCGCGGGACC GCGCCCACGC CGTCGCCGCC
GGCTTCCGCG CCGGGCTGGT CGCCTGA
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| Protein sequence | MRTVLVCVRT PLAAQHLTSA AARLGLSGAV RTAVSDPEVM LRLAERPADV VLVDTALTRP
DSAGFVRRVL ARAPQAAVVL LGVEESESAA ATISAGARGL IQGADHDLTS SVAKALLLLS
APGRANRHRV DPARDAASVG GSVRATPGGR APADPPSGWP AGAAEGAGGA PTVVPAQRGD
DPADPAGELA AVPAGGPARE PRPAVGLTER ELQVLLGMAE GKSNAEIGRE LFVSEDTVKT
HARRLFRKLG ARDRAHAVAA GFRAGLVA
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