Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5235 |
Symbol | |
ID | 8886444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5559998 |
End bp | 5560402 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003513962 |
Protein GI | 291302684 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.183919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.452557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAC TCTTCACACC CGACCTGCGT AACCCAGTCG TCGCCTGGGA AGTCATCGCC CGCTCCGCGG TCCACATCGT CCGCGAAGCC CGAGCCAGCC GACGCCTGGA ACCGCTCTCG ATCGACGGCC GCATGCTCTT CAAAGCCGTA GCGGCCCTCG GCATCGACCT GGAACCACCC AAACCCACCG CACTGCGCAC CAGCATCCAA CGCGGCCTGT CCGCCCGCGA ATCCCAAGTA CTGCTCGCCA TCGCCAGCGG CAAGTCCAAC GCCGAGATCG GCCGCGAACT GTTCATCACC GAAGACACCG TCAAAACCCA CGCCCGCCGC ATGTACCGCA AACTCGGCGC CCGCGACCGC GCCCACGCGG TAGCCGAAGC CTTCCGCGTC GGAATCCTCA CCTGA
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Protein sequence | MSTLFTPDLR NPVVAWEVIA RSAVHIVREA RASRRLEPLS IDGRMLFKAV AALGIDLEPP KPTALRTSIQ RGLSARESQV LLAIASGKSN AEIGRELFIT EDTVKTHARR MYRKLGARDR AHAVAEAFRV GILT
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