Gene Snas_5235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5235 
Symbol 
ID8886444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5559998 
End bp5560402 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003513962 
Protein GI291302684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.183919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.452557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAC TCTTCACACC CGACCTGCGT AACCCAGTCG TCGCCTGGGA AGTCATCGCC 
CGCTCCGCGG TCCACATCGT CCGCGAAGCC CGAGCCAGCC GACGCCTGGA ACCGCTCTCG
ATCGACGGCC GCATGCTCTT CAAAGCCGTA GCGGCCCTCG GCATCGACCT GGAACCACCC
AAACCCACCG CACTGCGCAC CAGCATCCAA CGCGGCCTGT CCGCCCGCGA ATCCCAAGTA
CTGCTCGCCA TCGCCAGCGG CAAGTCCAAC GCCGAGATCG GCCGCGAACT GTTCATCACC
GAAGACACCG TCAAAACCCA CGCCCGCCGC ATGTACCGCA AACTCGGCGC CCGCGACCGC
GCCCACGCGG TAGCCGAAGC CTTCCGCGTC GGAATCCTCA CCTGA
 
Protein sequence
MSTLFTPDLR NPVVAWEVIA RSAVHIVREA RASRRLEPLS IDGRMLFKAV AALGIDLEPP 
KPTALRTSIQ RGLSARESQV LLAIASGKSN AEIGRELFIT EDTVKTHARR MYRKLGARDR
AHAVAEAFRV GILT