More than 300 homologs were found in PanDaTox collection
for query gene Snas_1088 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1088  transcriptional regulator, LuxR family  100 
 
 
207 aa  402  1e-111  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  48.15 
 
 
268 aa  207  8e-53  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  47.43 
 
 
270 aa  204  7e-52  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  44.76 
 
 
198 aa  137  8.999999999999999e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  42.51 
 
 
203 aa  131  7.999999999999999e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  41.55 
 
 
198 aa  125  5e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.75 
 
 
198 aa  124  8.000000000000001e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_009664  Krad_0739  two component transcriptional regulator, LuxR family  43.75 
 
 
204 aa  116  1.9999999999999998e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.297506  normal  0.226729 
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  38.94 
 
 
223 aa  103  1e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal 
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  76.56 
 
 
253 aa  103  1e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0377  transcriptional regulator, LuxR family  58.33 
 
 
134 aa  103  2e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  44.12 
 
 
199 aa  102  3e-21  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_013947  Snas_5412  transcriptional regulator, LuxR family  73.13 
 
 
155 aa  102  3e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.207706  normal  0.221863 
 
 
-
 
NC_013947  Snas_2088  transcriptional regulator, LuxR family  54.46 
 
 
135 aa  102  3e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5235  transcriptional regulator, LuxR family  73.02 
 
 
134 aa  101  9e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.183919  normal  0.452557 
 
 
-
 
NC_013947  Snas_0966  transcriptional regulator, LuxR family  72.58 
 
 
134 aa  94.7  9e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159258  normal 
 
 
-
 
NC_013235  Namu_4745  two component transcriptional regulator, LuxR family  62.86 
 
 
209 aa  94.4  1e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0487  two component transcriptional regulator, LuxR family  35 
 
 
215 aa  84.7  8e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  36.31 
 
 
226 aa  84.3  0.000000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013947  Snas_4314  transcriptional regulator, LuxR family  65.57 
 
 
132 aa  83.2  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1473  transcriptional regulator, LuxR family  62.9 
 
 
203 aa  81.3  0.00000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.569189  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.76 
 
 
229 aa  80.1  0.00000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  35.68 
 
 
239 aa  79.7  0.00000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  35.44 
 
 
236 aa  79.7  0.00000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  29.81 
 
 
210 aa  78.6  0.00000000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  30 
 
 
210 aa  77.4  0.0000000000001  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  32.3 
 
 
210 aa  77.8  0.0000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  35.76 
 
 
218 aa  77.4  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  30 
 
 
210 aa  76.6  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  30 
 
 
210 aa  76.6  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  30 
 
 
210 aa  76.6  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  30 
 
 
210 aa  76.6  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  33.13 
 
 
210 aa  76.6  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  30 
 
 
210 aa  76.6  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  35 
 
 
231 aa  76.6  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  30.73 
 
 
213 aa  76.6  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  30 
 
 
210 aa  76.6  0.0000000000002  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  30 
 
 
210 aa  76.6  0.0000000000003  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  35.93 
 
 
219 aa  76.3  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  32.14 
 
 
220 aa  75.9  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  30 
 
 
210 aa  75.9  0.0000000000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.88 
 
 
239 aa  75.9  0.0000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_007413  Ava_4518  two component LuxR family transcriptional regulator  30.43 
 
 
236 aa  75.5  0.0000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  36.25 
 
 
216 aa  75.5  0.0000000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  32.53 
 
 
210 aa  75.1  0.0000000000007  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  28.57 
 
 
213 aa  75.1  0.0000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  32.53 
 
 
210 aa  75.1  0.0000000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  35.88 
 
 
206 aa  74.7  0.0000000000009  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1321  response regulator  30 
 
 
210 aa  74.3  0.000000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  31.25 
 
 
215 aa  74.3  0.000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36 
 
 
230 aa  73.9  0.000000000002  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.67 
 
 
250 aa  73.2  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2563  two component transcriptional regulator, LuxR family  36.71 
 
 
229 aa  73.6  0.000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.127898  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.7 
 
 
226 aa  73.6  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.42 
 
 
217 aa  73.9  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.227707 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  33.17 
 
 
224 aa  73.9  0.000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  34.94 
 
 
217 aa  73.2  0.000000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2342  response regulator receiver  45.35 
 
 
212 aa  73.2  0.000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88989  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  35.67 
 
 
239 aa  72.4  0.000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  36.78 
 
 
210 aa  72  0.000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  30.25 
 
 
207 aa  72.4  0.000000000005  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  30.25 
 
 
207 aa  72.4  0.000000000005  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  29.01 
 
 
207 aa  72  0.000000000006  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  35.63 
 
 
221 aa  72  0.000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  36.05 
 
 
226 aa  72  0.000000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  33.14 
 
 
222 aa  71.6  0.000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  34.13 
 
 
219 aa  71.6  0.000000000007  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  33.33 
 
 
234 aa  71.6  0.000000000008  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.86 
 
 
236 aa  71.6  0.000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  36.36 
 
 
216 aa  71.2  0.000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  34.34 
 
 
219 aa  71.2  0.000000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1820  two component transcriptional regulator, LuxR family  34.97 
 
 
216 aa  70.9  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.677493  normal  0.0923177 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  53.23 
 
 
218 aa  70.5  0.00000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  32.55 
 
 
238 aa  71.2  0.00000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.51 
 
 
244 aa  70.5  0.00000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  36.11 
 
 
225 aa  71.2  0.00000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  34.76 
 
 
223 aa  70.5  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  36.36 
 
 
221 aa  70.5  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  33.33 
 
 
213 aa  69.7  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  35.71 
 
 
213 aa  69.3  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.32 
 
 
213 aa  69.7  0.00000000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  28.66 
 
 
209 aa  69.7  0.00000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  34.24 
 
 
228 aa  69.7  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  33.91 
 
 
220 aa  69.7  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  31.64 
 
 
233 aa  69.3  0.00000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  33.52 
 
 
227 aa  68.9  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  32.77 
 
 
207 aa  68.9  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  34.15 
 
 
220 aa  68.9  0.00000000005  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  54.1 
 
 
228 aa  68.9  0.00000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  35.54 
 
 
227 aa  68.9  0.00000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  33.9 
 
 
203 aa  68.6  0.00000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  28.42 
 
 
220 aa  68.6  0.00000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  33.13 
 
 
212 aa  68.6  0.00000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  39.53 
 
 
212 aa  68.6  0.00000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  32.12 
 
 
209 aa  68.6  0.00000000007  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  36.97 
 
 
216 aa  68.2  0.00000000008  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  34.34 
 
 
218 aa  68.2  0.00000000008  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  35.71 
 
 
211 aa  68.2  0.00000000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  35.88 
 
 
225 aa  68.2  0.00000000009  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  33.91 
 
 
234 aa  68.2  0.00000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
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