| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0533 |
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| Symbol | |
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| ID | 5668951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 621210 |
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| End bp | 621869 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641239461 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001504899 |
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| Protein GI | 158312391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.405575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCTGG CCGACGACGA CGGCCTGGTG CGCAGCGGGC TGCGGGCGTT GCTGGACGCC
GAGCCGGACA TCTGTGTCGC CGCCGAGGCG GCCACCGGAG AGGAGGCGGT GCTGGCGGCA
CGCAGCTACC GGCCCGACGT CGTGCTCATG GACGTGCGCA TGCCCCGTCG GGACGGAGTC
TGGGCGACGT CCCAGATCAC CAGCTGGCCG CATCCTCGGC CGCGGGTCCT GGTGCTGACC
ACCTTCGACG TCGACAAGGT GGTCGAGGAC GCCCTCGCCG CCGGCGCCGA CGGCTTCCTG
CTCAAGCGGG CCACCCCTGA GCAGCTGATC GACGGCATCC GGGTGGTCGC CGGGGGCGAC
GCGCTGGTCG CCCCCGCGGT GACCCGCCGG CTGCTGGTCA CGCTCGCCCG CCGTCGCGTG
CCCGACCGCG AGCTGCTGAC GCGGGCCGAC CAGCTGACCG ACCGGGAGGC GGAGGTGCTG
CGGGCACTGG CCGAGGGCAG GTCGAACACC GAGATCGCGG CCGTCCTGAA CCTGTCGGTC
GAGACGGTCC GCACCCACGT CAAGCGGATC CTCAGCAAGC TGGGTGTCCG GGACCGCACC
CAGGCGGTGG TGTGGGCGTA CCGCGCCGGG TTCGTCGACA TGACGGCCCC CGGCCCCTGA
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| Protein sequence | MLLADDDGLV RSGLRALLDA EPDICVAAEA ATGEEAVLAA RSYRPDVVLM DVRMPRRDGV
WATSQITSWP HPRPRVLVLT TFDVDKVVED ALAAGADGFL LKRATPEQLI DGIRVVAGGD
ALVAPAVTRR LLVTLARRRV PDRELLTRAD QLTDREAEVL RALAEGRSNT EIAAVLNLSV
ETVRTHVKRI LSKLGVRDRT QAVVWAYRAG FVDMTAPGP
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