Gene Tfu_2278 details

Gene Information

• Locus tag: Tfu_2278
• ID: 3581577
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2683051
• End bp: 2683704
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637685987
• Product: LuxR response regulator receiver
• Protein accession: YP_290334
• Protein GI: 72162677
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCCGA TCACCGTTCT CACGGTGGAC GACAACATTG TCGTGCGTGC AGGCCTGGTC 
GCTCTGCTGG AGGCCTCCGA CGACATTCAG GTGGTCGGCG AGGCGAGCGA CGGCGCCGAG 
GCTGTGACGA AAGCCCAAGA GCTCCGGCCC GACGTCGTCC TGCTCGACGT GCGCATGCCG 
GTACGCGACG GGGTCAGCGT GGTGGAAGAA CTCGCCGAGT TCACCAAAGT CGTCATGCTC 
ACCCACACCG AAGACCCGCA GGTGATCCAG ACGTCGCTGC GCCGCGGCGC CTCCGGCTAT 
CTCGTGCACG GCAACTTCAC GCTAGACGAG TTGAACCGGG CACTGCGTGA AGTAGTGCAC 
GGCACTGGGA GTCCGCTCTC CCCAGTGGCT GCGACGGCTT TGGTCTCCTC GCTGCGTGCC 
GCTCCCCCTA CTCCGGTCCC AGTCGCCCCT GCGGCGTTAG GCCTCACCGA ACGGGAAGCT 
GAAGTGCTTG AAGCAGCGGC GCGTGGTCTG TCCAATGCTG AGATCGCGAA AGAACTCTTC 
CTTTCCGAAA AAACCGTGAA AAACCACATC AACCGAATTT TTCGGAAGTT GGGGGTGCGT 
ACCCGAGCAG CGGCGATCGC CCGGTGGAAC GGCCATGCAG GTCCCAGACC TTGA 

 

Protein sequence

MSPITVLTVD DNIVVRAGLV ALLEASDDIQ VVGEASDGAE AVTKAQELRP DVVLLDVRMP 
VRDGVSVVEE LAEFTKVVML THTEDPQVIQ TSLRRGASGY LVHGNFTLDE LNRALREVVH 
GTGSPLSPVA ATALVSSLRA APPTPVPVAP AALGLTEREA EVLEAAARGL SNAEIAKELF 
LSEKTVKNHI NRIFRKLGVR TRAAAIARWN GHAGPRP