Gene Snas_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1473 
Symbol 
ID8882661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1557339 
End bp1557950 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003510270 
Protein GI291298992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.569189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATA GGGAAACTTC CTCACCAATC GCACAGGAGT GTCCGTCCGC TACGGACGAA 
GACCCGTGGA TGTGGGTGGC GACCGCCGCC TACCGGGTCG CGAGGGCTTC GAGCTACGGG
CCGTGCCCGG ACGCGGACCT CCGCCAGCTT CAGGTCGCGG TGCGAGCCGC CCGCGGCGTG
GGTGATCCCG CGCCACGGCA GAACACCGGC CACCTGGTGC CCGGGCTGAC CGGCACGGTC
ACCCAGAAGA ACGGGGCGGT CATACCGGTG GCACGGGGGT ACGGCCACAC CATGACCGAC
CAGCCCGCAC GGGGTTACGG ACGCACGCTC ACCACCCAGC CGGGGGCGGA ACCACGCGGG
ATCGGGCCGC GTACCTCGGC CTACTACCGG GGCGACCAGC TGCCGAGCAT CAACGGGAAG
CAGCTGACGG TGCGGGAGTA CCAGATCCTC AACTGCGCGG CCCAGGGGAA GTCCAACGAG
CACATCGGCC GCGAGCTGTT CGTCAGCGAA CACACGATCA AGACTCACCT GCGTCGACTC
TTCGACAAGA TCGGCGCCGC CAACCGCGCT CACGCGGTGG CCATCGCCTT CCGGCAGGGA
GCCCTGTCCT AA
 
Protein sequence
MANRETSSPI AQECPSATDE DPWMWVATAA YRVARASSYG PCPDADLRQL QVAVRAARGV 
GDPAPRQNTG HLVPGLTGTV TQKNGAVIPV ARGYGHTMTD QPARGYGRTL TTQPGAEPRG
IGPRTSAYYR GDQLPSINGK QLTVREYQIL NCAAQGKSNE HIGRELFVSE HTIKTHLRRL
FDKIGAANRA HAVAIAFRQG ALS