More than 300 homologs were found in PanDaTox collection
for query gene Snas_1473 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_1473  transcriptional regulator, LuxR family  100 
 
 
203 aa  419  1e-116  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.569189  normal 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  45.3 
 
 
270 aa  84.7  9e-16  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  43.97 
 
 
203 aa  83.6  0.000000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  64.52 
 
 
268 aa  83.6  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  59.42 
 
 
198 aa  82  0.000000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  60.66 
 
 
253 aa  80.9  0.00000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  57.97 
 
 
198 aa  80.9  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013947  Snas_1088  transcriptional regulator, LuxR family  62.9 
 
 
207 aa  80.9  0.00000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  62.71 
 
 
198 aa  79.3  0.00000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_013947  Snas_5235  transcriptional regulator, LuxR family  59.68 
 
 
134 aa  78.6  0.00000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.183919  normal  0.452557 
 
 
-
 
NC_013947  Snas_0377  transcriptional regulator, LuxR family  54.93 
 
 
134 aa  77.4  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2088  transcriptional regulator, LuxR family  55.07 
 
 
135 aa  76.3  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  50 
 
 
199 aa  76.6  0.0000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_009664  Krad_0739  two component transcriptional regulator, LuxR family  61.02 
 
 
204 aa  76.3  0.0000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.297506  normal  0.226729 
 
 
-
 
NC_013947  Snas_0966  transcriptional regulator, LuxR family  61.29 
 
 
134 aa  75.9  0.0000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159258  normal 
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  53.85 
 
 
223 aa  75.5  0.0000000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal 
 
 
-
 
NC_013947  Snas_5412  transcriptional regulator, LuxR family  59.68 
 
 
155 aa  74.7  0.0000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.207706  normal  0.221863 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  53.45 
 
 
213 aa  73.6  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  50 
 
 
234 aa  67.4  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013235  Namu_4745  two component transcriptional regulator, LuxR family  57.89 
 
 
209 aa  67.8  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  47.69 
 
 
209 aa  67.4  0.0000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  50.77 
 
 
221 aa  67.8  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  50.77 
 
 
221 aa  67.8  0.0000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0444635 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  41.43 
 
 
250 aa  67  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  46.88 
 
 
208 aa  66.6  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  45.31 
 
 
207 aa  67.4  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013456  VEA_002362  DNA-binding HTH domain-containing protein  41.18 
 
 
214 aa  67  0.0000000002  Vibrio sp. Ex25  Bacteria  normal  0.0501055  n/a   
 
 
-
 
NC_013947  Snas_4314  transcriptional regulator, LuxR family  50 
 
 
132 aa  66.2  0.0000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  38.74 
 
 
214 aa  66.2  0.0000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  49.23 
 
 
216 aa  66.2  0.0000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  48.33 
 
 
239 aa  65.9  0.0000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.44 
 
 
229 aa  65.9  0.0000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  48.33 
 
 
212 aa  65.9  0.0000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03706  hypothetical protein  35.51 
 
 
214 aa  65.9  0.0000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.16 
 
 
218 aa  65.9  0.0000000005  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  49.15 
 
 
228 aa  65.5  0.0000000005  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  42.42 
 
 
238 aa  65.1  0.0000000006  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  47.54 
 
 
213 aa  65.1  0.0000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  52.46 
 
 
211 aa  65.1  0.0000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  53.33 
 
 
201 aa  64.7  0.0000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  33.54 
 
 
222 aa  64.3  0.000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008254  Meso_2457  LuxR family transcriptional regulator  49.25 
 
 
554 aa  64.7  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  46.15 
 
 
222 aa  64.3  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  37.63 
 
 
210 aa  63.2  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  41.89 
 
 
209 aa  63.9  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  42.03 
 
 
231 aa  63.5  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  48.21 
 
 
236 aa  63.5  0.000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  48.48 
 
 
213 aa  63.2  0.000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal 
 
 
-
 
NC_007348  Reut_B5475  regulatory protein, LuxR  49.21 
 
 
911 aa  63.2  0.000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.450601  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  44.26 
 
 
212 aa  62.8  0.000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  46.03 
 
 
209 aa  63.2  0.000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  34.19 
 
 
218 aa  62.8  0.000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  45.9 
 
 
210 aa  62.8  0.000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  37.78 
 
 
225 aa  63.2  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  37.8 
 
 
210 aa  62.8  0.000000004  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  37.8 
 
 
210 aa  62.4  0.000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  47.69 
 
 
212 aa  62.8  0.000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  40.54 
 
 
213 aa  62.4  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  43.08 
 
 
211 aa  62.4  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_009457  VC0395_A2814  LuxR family transcriptional regulator  36.89 
 
 
214 aa  62  0.000000005  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  46.88 
 
 
206 aa  62.4  0.000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  45.16 
 
 
230 aa  62  0.000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  43.48 
 
 
222 aa  62  0.000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1228  LuxR family transcriptional regulator  43.94 
 
 
204 aa  62  0.000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  49.15 
 
 
222 aa  61.6  0.000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  37.8 
 
 
210 aa  61.6  0.000000007  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  47.46 
 
 
224 aa  61.6  0.000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  31.96 
 
 
303 aa  61.6  0.000000008  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.49 
 
 
239 aa  61.2  0.000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008345  Sfri_1517  transcriptional regulator, LuxR family protein  49.15 
 
 
210 aa  61.2  0.000000009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.776537  n/a   
 
 
-
 
NC_013093  Amir_5676  transcriptional regulator, LuxR family  40 
 
 
953 aa  61.2  0.000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.228112  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  46.97 
 
 
231 aa  61.2  0.000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_009523  RoseRS_0799  response regulator receiver protein  44.62 
 
 
204 aa  61.2  0.000000009  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.403434 
 
 
-
 
NC_013235  Namu_3769  transcriptional regulator, LuxR family  31.51 
 
 
205 aa  61.2  0.000000009  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0158689  normal  0.601222 
 
 
-
 
NC_008463  PA14_19850  putative transcriptional regulator  40 
 
 
827 aa  60.8  0.00000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.326832  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  43.48 
 
 
221 aa  61.2  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  28.23 
 
 
211 aa  60.8  0.00000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  46.88 
 
 
220 aa  60.8  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  44.44 
 
 
228 aa  60.8  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_009511  Swit_0502  regulatory protein, LuxR  48.44 
 
 
861 aa  60.8  0.00000001  Sphingomonas wittichii RW1  Bacteria  normal  0.0169233  normal  0.80601 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  47.46 
 
 
233 aa  60.8  0.00000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  38.82 
 
 
218 aa  60.1  0.00000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  50.94 
 
 
217 aa  60.1  0.00000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  42.86 
 
 
217 aa  60.1  0.00000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal 
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  41.27 
 
 
238 aa  60.1  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_008009  Acid345_2902  LuxR family transcriptional regulator  55.77 
 
 
153 aa  60.5  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  43.75 
 
 
242 aa  60.1  0.00000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013204  Elen_2193  transcriptional regulator, LuxR family  36.78 
 
 
258 aa  60.1  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  31.82 
 
 
213 aa  60.1  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_009656  PSPA7_1706  transcriptional regulator  50 
 
 
827 aa  60.5  0.00000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.76 
 
 
236 aa  60.5  0.00000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  45.76 
 
 
239 aa  60.1  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
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