| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5676 |
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| Symbol | |
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| ID | 8329883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6692533 |
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| End bp | 6695394 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 644946114 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003103337 |
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| Protein GI | 256379677 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.228112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACGTC TCGGTTCCGG AATCCCCCTG GTGGCGCGCG TCCGGGAGCT CACGGGCCTG
CGGACAGCGC TCCAGGACGC GGTGCTCGGC AGGCCGGGCG CGGTGCTCGT CTCCGGCGAG
GCCGGGGTCG GCAAGTCGCG GCTGGTCGAC GAGCTGGCGC GCTCGGCGGG CGACGCGCTG
GTCCTCGGCG GTCGCTGCCT GGACGTCGCC GAGACCGGGG TGCCCTACCC GCCGTTCACC
GAGGTCGCCC GGCGGGTGCG CGCCGAGGGG CTGCTCGACC TCGACGCCCG GCCCGCGCTG
CGCTGGCTGC TGCCCGAGCT GAGCCCGGTC CCCGACCGGG GCGCGGTCGA CCCGCACGGG
GTGCGGCTGC CCGGCAGGCG GGGCGAGCAG GACACCGGGC AGCTGCGGCT GTTCGACGCC
GTCCTCGCCC TGCTCACCGA CCTCGCCGCG CGCGGCCCCG TGCTCCTGGT GCTGGAGGAC
CTGCACCTCG CGGACGCCTC CACCCGCGCC CTCCTGGTGT TCCTGCTGTC CCGGCTGCGC
GACCAGCGGC TGCTCGTGGT CACCACGCAC CGCTCCGACG ACCTGCGCCG CGACCACCCG
CTGCGGCCCG TGCTCGCCGA GCTGGGACGC CTGCCGTCGG TGCGGCGGCT CGACCTCGCG
CCGCTGAGCG CCATCGACAC CCGCGGCCTC GTCGCCGCGC TGGACGCCGG CCTGTCCGAC
GAGCTGGTGC TGCGGGTCGC CGAGCGCGCC GAGGGCAACC CGTTCCTGGC CGAGGAGCTG
GCCGCCGACC CGCACACCCT GGGCGAGCCG TCGCTGGCCC GCGCGTCCCT GCTCGGGCCG
GGGGCCGCGC GCGTGGCGCG GGTCGTCGCC GTCGCCGGGC GCCCGCTGCG GGCGGTGGAC
CTGGCGGCGT TCACCGACGA CGTCGAGCTG GGGGGCGCGC TGCGCGAGGC CGTCCGGCAC
GGCGTGCTCG TCGAGCGGGA CGGGGCCTAC CGGTTCCGGC ACGCGCTCGC CCGCGAGGCG
GTGCTCGCCG ACCTGCTGCC CGGCGAGCGG GTGCGCCTGC ACGCCGCGTT CGCCGAACTG
CTCGGGACCA CCACCGGGCG CGGCGTCGCC GCCTCGGTGG CCCACCACGC GCTGGCCGCC
GGGAACCCGG CGCTGGCGCT CGCGTCGTCC GTGCGGGCGG CGGCCGAGGC GGCGGCCTGC
GGGGCGCCCG CCGAGGCGCT GCGGCACCGC GAGGTCGCGC TGCGGCTGTG GACCACCGCC
GGGCGCACGC CGTCCGGGAT CACCGAGGCC GACCTGCTTC GCCAGGCGTC GTGGGCCGCG
GGGGCCAGCG GGCTCCCGGA GCGCGCGGTG GCGCTGGCCC GCGCGGGCGT CGAGCTGGTC
GACGGGACCG GGCCTGAGGC CGGGGCCGCG CTGTGGCTGC GGCTGGCCCG CGCGCTGGCC
GAGCTGGACG ACGCCGACGG CGAGCGCGAG GCCGCCGTCG AGCAGGCGTG GCTGCTGCTG
CGGGACCGGC CCGCGTGCGC CGAGCGCGCC GAGGTGCTGG CCGGCTGGGC GGCGGCGCTG
CACGAGGGCG GCAAGCGGGC CGAGGCCGCC GAGCGGGCCG AGCAGGCCGT CGCCGACGGG
CGGGCCTCCG GTGCCTGGGC CGCCGTGGCC GACGCGCTCA CCACGCTGGC GGTGCTGGAC
GCGGAGGACG GGCGCGGGGA GTCGGCGCTG CGCAGGCACC TGGAGGCCGT GGAGCACGCG
CGCGGCGGCG GCGCGGTCGG GGCCGAGCTG CGGGCCCGGC GGGCGCTGGG GCGGTTCCAC
CACGACACCG GGCAGCCGGG GCGCGCGGTG GAGGCGTTCG ACGCCGGGGT GCGCCGGGCC
GACGAGACCG GGGTCGCGTG GAGCGCGCTG GGCGTGGAGC TGCGGGCCTG GCAGGTGCTC
ACCCGCTACC GCGCGGGCGA CTGGGCCGGT GCCGCGGGCG CCGCCGGTGA GGCCGGGGCC
TGGGGGTCGG AGCGGTTGGC CGCCGCGCGC GCCCAGCTCC TGGTGGGGCG CGGCGAGTTC
GAGGCCGCCG AGCGGGAGCT GACCGGGTTG CGCTGGTCCC GCGACGCGTG GACCGCCGAG
GTCGCGGGCG CGGCCGACGT GGAGCTGCTG CTGTGGCGCG GCCAGCCCGA CTCGGCGGTG
GACCGGGCGG TCGAGGCCAC CGGGGTCTGC GCCTGCCCGG CCGGGGTGCT CCGGCTGCTC
GCGCTCGGCG TGGCCGCGTG GGCGGAGCTG GCCGGACGGG CGCGCAGGCG CCGGGACCGG
GACGCCGAGG AGCGCGCGGT CGCCGAGGGG CGGGCGCTGG CCGGACGCGC CAGGGCCGTC
CGGGGCGGCG GCGCGGACGC GGCGGCCTGG CTGGCGCGCG TGGACGCCGA GGAGGACCGG
CTCGTCGGCG GGGTGGTCAC CGGGCCGTGG CTGGTCGCCG CCGAGCTGTA CGGGGACGCC
CACGAGCAGG CGGTGTGCCG GTGGCGCGCG GCCGAGACCG CCCTGGCGCG CGGGCAGCGG
GAGCAGGCCG CGACCCTGCT GAAGGCCGCC GACACCGCGG CCGAGCTGCT CGGGGCGCGC
CCATTGCGCG ACGCGGTGCG GCAGACCGCC CGGCGCGGCC GGGTCGTGCT GCGCGGCGAG
GTGCCCGGCG GGCAGGTGGA CCCGTTCACC CCGCGCGAGC GCTCGGTGCT GGCGCTGGTG
GCGCTCGGGC GCACCAACCG CGAGGTCGGC GAGGAGCTGG TGATCAGCGA GAAGACGGTG
AGCGTGCACC TCACCCGCAT CATGGCCAAG CTCGGCGCGG GCAGGCGCGG CGAGGCGGTG
GCGATCGCGT TCGAGCGGGG GCTGCTGGAC GTCACCGGCT AG
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| Protein sequence | MARLGSGIPL VARVRELTGL RTALQDAVLG RPGAVLVSGE AGVGKSRLVD ELARSAGDAL
VLGGRCLDVA ETGVPYPPFT EVARRVRAEG LLDLDARPAL RWLLPELSPV PDRGAVDPHG
VRLPGRRGEQ DTGQLRLFDA VLALLTDLAA RGPVLLVLED LHLADASTRA LLVFLLSRLR
DQRLLVVTTH RSDDLRRDHP LRPVLAELGR LPSVRRLDLA PLSAIDTRGL VAALDAGLSD
ELVLRVAERA EGNPFLAEEL AADPHTLGEP SLARASLLGP GAARVARVVA VAGRPLRAVD
LAAFTDDVEL GGALREAVRH GVLVERDGAY RFRHALAREA VLADLLPGER VRLHAAFAEL
LGTTTGRGVA ASVAHHALAA GNPALALASS VRAAAEAAAC GAPAEALRHR EVALRLWTTA
GRTPSGITEA DLLRQASWAA GASGLPERAV ALARAGVELV DGTGPEAGAA LWLRLARALA
ELDDADGERE AAVEQAWLLL RDRPACAERA EVLAGWAAAL HEGGKRAEAA ERAEQAVADG
RASGAWAAVA DALTTLAVLD AEDGRGESAL RRHLEAVEHA RGGGAVGAEL RARRALGRFH
HDTGQPGRAV EAFDAGVRRA DETGVAWSAL GVELRAWQVL TRYRAGDWAG AAGAAGEAGA
WGSERLAAAR AQLLVGRGEF EAAERELTGL RWSRDAWTAE VAGAADVELL LWRGQPDSAV
DRAVEATGVC ACPAGVLRLL ALGVAAWAEL AGRARRRRDR DAEERAVAEG RALAGRARAV
RGGGADAAAW LARVDAEEDR LVGGVVTGPW LVAAELYGDA HEQAVCRWRA AETALARGQR
EQAATLLKAA DTAAELLGAR PLRDAVRQTA RRGRVVLRGE VPGGQVDPFT PRERSVLALV
ALGRTNREVG EELVISEKTV SVHLTRIMAK LGAGRRGEAV AIAFERGLLD VTG
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