| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5428 |
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| Symbol | |
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| ID | 8336782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6254572 |
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| End bp | 6255177 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958526 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003116128 |
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| Protein GI | 256394564 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.358603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCCGACG ACCAGGCGGC GGTACGCGAC GGCCTGGTCG CGCTGTTGTC GGTGACGGCC
GGCGTCGAGG TCGTCGGCGA GGCCGCGAAC GGCGCGGCGG CAGTCGCTGC GGCCGAGACA
CTGCGGCCCG ACGTCGTGCT CATGGACCTG CGCATGCCCG GTGTGGACGG CGTCGAGGCG
ACGCGGCGCA TCGCGCAAAG CGCCCCGGAT GTGCGAGTCG TGGTCCTCAC CACGCATGCC
GACGACGCCT CGATTCTCAA GGCCCTGCGA GCCGGCGCCA CCGGCTACCT CACCAAGGAA
TCCGGCCGCG CCGAGATCGC CCGCGCCATC GAGGCCGCGG CCTCCGGACA ATCGGTCCTG
GACGACGGCG TCACGGCGAT ACTGCTCGCC GCCGCCGTGG AGGTCCCGGC CTCGGCCGAC
CTCACACCGC GCGAAGCCGA GGTACTGACG CTGATCGCGC GCGGCAAGTC CAACACCGAG
ATCGCGGGGG AGCTGTTCGT CTCCGCCGCG ACCGTGAAGA CACATATCAA CAACCTGTTC
GCGAAGATCG GCGTGCGCGA CCGGGCTCAG GCGGTGCGGT ACGCGCTGCG GCGCGGGCTC
GACTGA
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| Protein sequence | MADDQAAVRD GLVALLSVTA GVEVVGEAAN GAAAVAAAET LRPDVVLMDL RMPGVDGVEA
TRRIAQSAPD VRVVVLTTHA DDASILKALR AGATGYLTKE SGRAEIARAI EAAASGQSVL
DDGVTAILLA AAVEVPASAD LTPREAEVLT LIARGKSNTE IAGELFVSAA TVKTHINNLF
AKIGVRDRAQ AVRYALRRGL D
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