| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2668 |
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| Symbol | |
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| ID | 5107977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2928192 |
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| End bp | 2928833 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503912 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001188155 |
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| Protein GI | 146307690 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.18046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG CCACCCCCAT CCGCGTGCTG GTCGCCGATG ACCACCCGCT GCTGCGCGAG
GGCATCGCCG CCGTACTGAC GGCGCAGGCG GATATCGAAC TGGTGGGCGA GGCCGGCGAC
GGCCAGGAGG CGCTGGACTG CTTCCGCCGC CTGCGCCCGG ACGTCACCCT GATGGACCTG
CAGATGCCGC GCATGAACGG CATCGAGAGC ATCCAGGCCA TCCGCAGCGA ATGCCCGAGC
GCACGCATCG CCATCCTCAC CACCTACCGC GGCGACGTAC GCGCCCTGCA TGCCATCCAG
GCCGGCGCCC AGGCCTACCT GCTGAAAAGC AGCCTGCGCA AGGAGCTGGT CGAGACCATT
CGCCTGGTAG CCGCGGGCAA GCGCCACATT CCAGCGGAGA TCGCCGCCGA ACTGGCCGAG
CATATCGGCC AGCAGTGCCT CAGCCCCCGC GAGGTCGAGG TACTGCAGGC GGCGGCGCTG
GGCTATTCCA ACCGCGACAT CGCCCTGCAA CTGCGTATCA CCGAGGACAC GGTAAAGGGG
CATATGCGCC TGATCATGGA CAAGCTCGGC GCCAACAATC GCACCCACGC CGTGGCCATT
GCCGTGCAGC GCGGCGTTCT CGAGGTCGGC CCCCCACTTT AG
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| Protein sequence | MSIATPIRVL VADDHPLLRE GIAAVLTAQA DIELVGEAGD GQEALDCFRR LRPDVTLMDL
QMPRMNGIES IQAIRSECPS ARIAILTTYR GDVRALHAIQ AGAQAYLLKS SLRKELVETI
RLVAAGKRHI PAEIAAELAE HIGQQCLSPR EVEVLQAAAL GYSNRDIALQ LRITEDTVKG
HMRLIMDKLG ANNRTHAVAI AVQRGVLEVG PPL
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