More than 300 homologs were found in PanDaTox collection
for query gene Rcas_1228 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009767  Rcas_1228  LuxR family transcriptional regulator  100 
 
 		 204 aa  394  1e-109  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal  1 
 
 
-
 
NC_009523  RoseRS_0799  response regulator receiver protein  79.41 
 
 		 204 aa  286  2e-76  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.403434 
 
 
-
 
NC_013526  Tter_2446  transcriptional regulator, LuxR family  45.41 
 
 		 188 aa  123  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4091  LuxR family transcriptional regulator  38.92 
 
 		 191 aa  122  3e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0720604  n/a   
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  37.56 
 
 		 209 aa  118  7e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal  1 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  36.67 
 
 		 207 aa  108  6e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  38.39 
 
 		 209 aa  103  1e-21  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  36.62 
 
 		 210 aa  100  1e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  37.62 
 
 		 211 aa  100  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0451998 
 
 
-
 
NC_008025  Dgeo_1496  LuxR family transcriptional regulator  36.14 
 
 		 197 aa  99  5e-20  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  37.02 
 
 		 212 aa  97.8  9e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  34.76 
 
 		 213 aa  97.8  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  35.71 
 
 		 212 aa  97.4  1e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  36.02 
 
 		 218 aa  97.1  2e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  37.26 
 
 		 224 aa  96.7  2e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  43.48 
 
 		 211 aa  95.5  5e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  34.12 
 
 		 222 aa  94.7  9e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  35.81 
 
 		 224 aa  94  1e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  34.13 
 
 		 227 aa  92.8  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  36.87 
 
 		 216 aa  92.4  4e-18  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  40.28 
 
 		 215 aa  92  5e-18  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  36.45 
 
 		 220 aa  92  6e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  34.78 
 
 		 206 aa  91.3  8e-18  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  40.28 
 
 		 215 aa  91.3  9e-18  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0906  transcriptional regulator, LuxR family  54.35 
 
 		 208 aa  91.3  9e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.000000244022  n/a   
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.85 
 
 		 213 aa  90.9  1e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  34.63 
 
 		 218 aa  90.9  1e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  35.41 
 
 		 205 aa  90.5  1e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  39.58 
 
 		 215 aa  90.9  1e-17  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  36.49 
 
 		 208 aa  90.9  1e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  39.58 
 
 		 215 aa  90.1  2e-17  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  34.42 
 
 		 215 aa  90.1  2e-17  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  34.42 
 
 		 215 aa  90.1  2e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  34.42 
 
 		 215 aa  90.1  2e-17  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  34.42 
 
 		 215 aa  90.1  2e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  34.32 
 
 		 213 aa  90.5  2e-17  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  34.29 
 
 		 207 aa  90.1  2e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  34.42 
 
 		 215 aa  90.1  2e-17  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  42.25 
 
 		 209 aa  90.1  2e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  36.71 
 
 		 212 aa  89.7  3e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  32.84 
 
 		 213 aa  89.7  3e-17  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  32.16 
 
 		 216 aa  89.7  3e-17  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  31.13 
 
 		 218 aa  89  4e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  30.56 
 
 		 221 aa  88.6  5e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  33.8 
 
 		 207 aa  88.6  5e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  35.5 
 
 		 217 aa  89  5e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  38.89 
 
 		 215 aa  88.6  5e-17  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.72 
 
 		 221 aa  88.6  5e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  41.35 
 
 		 228 aa  88.2  7e-17  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  33.64 
 
 		 223 aa  88.2  8e-17  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  36.67 
 
 		 211 aa  87.4  1e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  35.65 
 
 		 212 aa  87.8  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  32.5 
 
 		 231 aa  87.4  1e-16  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  33.16 
 
 		 208 aa  87.8  1e-16  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  42.86 
 
 		 212 aa  87.4  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  36.84 
 
 		 213 aa  87.4  1e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  32.08 
 
 		 221 aa  87.4  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  37.84 
 
 		 222 aa  87  2e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  34.27 
 
 		 227 aa  86.7  2e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  34.93 
 
 		 209 aa  87  2e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  33.33 
 
 		 219 aa  87  2e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.42 
 
 		 223 aa  86.7  2e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal  1 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  42.62 
 
 		 213 aa  86.7  2e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  34.76 
 
 		 206 aa  85.9  3e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  35.51 
 
 		 223 aa  86.3  3e-16  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  30.7 
 
 		 213 aa  86.3  3e-16  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.73 
 
 		 237 aa  85.9  4e-16  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  35.27 
 
 		 220 aa  85.9  4e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  34.6 
 
 		 214 aa  85.9  4e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  30.95 
 
 		 218 aa  85.9  4e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  34.12 
 
 		 207 aa  85.5  5e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  38.03 
 
 		 230 aa  85.5  5e-16  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  32.64 
 
 		 208 aa  85.5  5e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  34.74 
 
 		 221 aa  85.1  6e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  31.48 
 
 		 213 aa  85.1  6e-16  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  42.98 
 
 		 226 aa  84.7  8e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  35.94 
 
 		 222 aa  84.7  9e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_2136  two component LuxR family transcriptional regulator  34.33 
 
 		 254 aa  84.7  9e-16  Arthrobacter sp. FB24  Bacteria  normal  0.0553154  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  33.17 
 
 		 219 aa  84.3  0.000000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  35.32 
 
 		 220 aa  84.3  0.000000000000001  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  33.33 
 
 		 214 aa  84  0.000000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_009921  Franean1_4062  two component LuxR family transcriptional regulator  36.22 
 
 		 216 aa  84  0.000000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0448793  normal  0.300284 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  35.32 
 
 		 220 aa  84  0.000000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  41.74 
 
 		 217 aa  84.3  0.000000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  35.82 
 
 		 219 aa  84.3  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_013757  Gobs_4942  two component transcriptional regulator, LuxR family  32.71 
 
 		 222 aa  84  0.000000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  47.62 
 
 		 215 aa  83.2  0.000000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0857  two component LuxR family transcriptional regulator  57.58 
 
 		 211 aa  83.2  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.00237341  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  31.65 
 
 		 238 aa  83.6  0.000000000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  46.09 
 
 		 215 aa  84  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  32.7 
 
 		 209 aa  83.2  0.000000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  32.26 
 
 		 250 aa  83.6  0.000000000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  31.25 
 
 		 216 aa  83.6  0.000000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009921  Franean1_6933  two component LuxR family transcriptional regulator  36.22 
 
 		 244 aa  83.2  0.000000000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.322421 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  34.34 
 
 		 222 aa  82.8  0.000000000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  36.71 
 
 		 220 aa  82.8  0.000000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  31.28 
 
 		 212 aa  83.2  0.000000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  30.05 
 
 		 219 aa  82.8  0.000000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0902  two component transcriptional regulator, LuxR family  57.58 
 
 		 208 aa  83.2  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.154451  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  34.95 
 
 		 226 aa  82.4  0.000000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
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