Gene Namu_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3769 
Symbol 
ID8449388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4136278 
End bp4136895 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content73% 
IMG OID645042820 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003203056 
Protein GI258653900 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0158689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.601222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGGC AACGCAGTGC CATCGCGGAC CACCGCCGTC TGGGCGGATC CGCCGAGCCC 
ACCGACCTCG TGGCCGGGGC GATGACCGTG CTCATCGCCG ATCCGGTGCC CAGCAGCCGG
GAACGGCTGG CCACCGAATT GGCCTCCGGC GGGGCCGGTC AGGTCATCCA GGCCGACAGC
GTGCGTGCCG TGGAGATCCT GATCGAGAAC TCGACCGGCG GTCAGCTGGC CCTGGTCAGC
CTGGGTTTCG GCGATCCGGC GCCCCGACTG ATCCGCGGCC TGGCCCAGGT TCCGTGGACC
CGGGTGCTGG CCGTGGCCCT GTCCCGGCAA CCGGAGCCGC TGCTGGCCGC CCTGGCCGCC
GGCGCCACCG GCGTGCTGCG GGGACACCCG GGAGGCGCCG ACCCGGATCT GTCCGGCCGG
CTGGGCCGGT TGACCGCCCG TGAACTGGAC GTGCTGCGGC TGGTCGCCGA GGGTCGCACC
AATAAGTGGA TCGCCGAACA GCTGTCGCTG TCGGCGTTGA CCGTCAAGAG CCACCTGGCC
CGGATCAGCC GCAAGCTGGG CACTGGCGAC CGCTCGCACC AGGTCGCGGT GGCCATGCGC
GCCGGGATGA TGCGCTAA
 
Protein sequence
MPRQRSAIAD HRRLGGSAEP TDLVAGAMTV LIADPVPSSR ERLATELASG GAGQVIQADS 
VRAVEILIEN STGGQLALVS LGFGDPAPRL IRGLAQVPWT RVLAVALSRQ PEPLLAALAA
GATGVLRGHP GGADPDLSGR LGRLTARELD VLRLVAEGRT NKWIAEQLSL SALTVKSHLA
RISRKLGTGD RSHQVAVAMR AGMMR