| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1228 |
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| Symbol | |
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| ID | 5538697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1587281 |
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| End bp | 1587895 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893363 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001431343 |
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| Protein GI | 156741214 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.118696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCGCG TCCTGATCGT CGCTCCCACG CCGGCGCTGC GTGCCGGGTT GCGCGCACTG
CTCACCGCAG CAAACGTCGA GATCATCGAC GCCATCGGAT CGCTCGTTGA TCTGTCAGGC
ATTGCCGCCG ACATCGACGT CATCCTGGCG GCGGACGAAA GCGTGCTGGC CGACGCCGAT
CAGGTGCTGG CAGAGGAGCC GCGCTATGCA GCGCTGCTCC TGAGCGACGA CCCGCGGCAG
GCGGACGTCC TGCGCGGCCT GCCGTTGACT GCATGGGGCA TCCTGACGCA CGATGTCGGC
GCGGCGGAAC TGGCAGCGGC GCTCCATGCC GTCGCGCAGG GGCTGATCGT CCTCGCGCCG
AACCTGGCGG CGCGTCTGCT TCAGGCGCGT CAGTCGCCCG TCGAAGAGCC GACCGGCGAA
CCGCTGACAG CGCGCGAACG CGATGTGCTC GAACTGGTGA GCCAGGGGTT ATCGAACAAA
CAGATCGCCC AGAAGTTGCA CATTAGCGAA CATACCGTCA AGTTTCACCT GTCATCGCTC
TTTGCCAAAC TCGGCGTTTC AAGTCGCACC GAGGCGGTCA ATCGCGGTGC GCGCCAGGGG
ATCATCACCC TGTAA
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| Protein sequence | MIRVLIVAPT PALRAGLRAL LTAANVEIID AIGSLVDLSG IAADIDVILA ADESVLADAD
QVLAEEPRYA ALLLSDDPRQ ADVLRGLPLT AWGILTHDVG AAELAAALHA VAQGLIVLAP
NLAARLLQAR QSPVEEPTGE PLTARERDVL ELVSQGLSNK QIAQKLHISE HTVKFHLSSL
FAKLGVSSRT EAVNRGARQG IITL
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