Gene VIBHAR_03706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03706 
Symbol 
ID5554587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3743180 
End bp3743824 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID640909185 
Producthypothetical protein 
Protein accessionYP_001446847 
Protein GI156975940 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAT CGGCTTATGC GAGAAAACTT TTTCTAATCA GCATGGAAGA GGATGCAGGG 
AAAAAGGTCG AAGCTCTGGA GAAGTATACA GATATCGACA TCCCCGTCAT TTCGACCCAA 
GCACTGATGG AAGCAAACCC GAAGCACCGC AATAAAATCT TGCTTATCGA CTTCAGTGAG 
CACAAAGAGT TAGTTCTATC GATAAAAAAC CTTCCCCTGA TTTGGAAGAA TTTCGAAACA 
GTCGTGTTCA ACGTTCCTAA ACGTTTGACG ACAGATGAGC TATTGGCGTT TGGTCAATTG 
AAAGGCATCT TCTATGAAGA GAGTTCTTTT GAGCAGATTG GCGAAGGGTT AAAGGAAATC 
ATTAATGGTC AAAACTGGCT GCCTCGCAAT GTCACCAGTC AACTTCTCCA TTATTATCGT 
AACGTCATTA GTACCCACAC CGCTCCTGCC ACCGTCGATT TGACTATTCG TGAACTGCAA 
GTACTTCGCT GCCTGCAAGC TGGCGCATCA AACAATCAAA TGGCCGAAGA GTTATTCGTG 
AGCGAATTCA CTATCAAGTC TCACCTGTAT CAGATTTTTA AGAAGCTTTC GGTCAAAAAC 
CGTGTACAAG CGATTGCTTG GGCTGACCAA AACCTGATGT CATAA
 
Protein sequence
MKKSAYARKL FLISMEEDAG KKVEALEKYT DIDIPVISTQ ALMEANPKHR NKILLIDFSE 
HKELVLSIKN LPLIWKNFET VVFNVPKRLT TDELLAFGQL KGIFYEESSF EQIGEGLKEI 
INGQNWLPRN VTSQLLHYYR NVISTHTAPA TVDLTIRELQ VLRCLQAGAS NNQMAEELFV 
SEFTIKSHLY QIFKKLSVKN RVQAIAWADQ NLMS