| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1517 |
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| Symbol | |
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| ID | 4277472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1812039 |
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| End bp | 1812671 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638134297 |
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| Product | transcriptional regulator, LuxR family protein |
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| Protein accession | YP_750206 |
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| Protein GI | 114562693 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.776537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAG TTGAAAATTG GATGATCGTA TCGCGTTCGC AGTTGTTAAT CGATTTACTT
GATTCTCGCT GGCCACAAGA GTTTTTGGTT AAATTAACTA AGGCTCAGCC AGGTAATATG
TCTAAGTTAC TTTCCACACA AACCAACTCA ATGGTGGTTT TCGATTTAGC AACAATTGAT
CTTCAGCAAG CATATCAACT ACAACGCGTT ATTGAACGTG AATATTGTGG TATTCGTACC
GTTTTTCTAA ATTTCCCTAA ACAAGTTGAT GCAAAATTTT TAATTCATCC ATCGACCACA
ACAGGTGTCT TCTATACCAA TGCTAATTTA GCTGATGTTA GTAGCGGTTT AAATGAAATA
CTAAAAGGCC GTAGTGTAAT CCCTCAAGAT CTCTATCAAT CGTTAATGAG TGTTAACCAT
GACGATGACA GTGAACAACT GACCATTCGT GAACGTGAGG TATTACAAAC GTTGTTGTCT
GGCAGCACAA ATCTCGATAT CGCTAATCAA CTATTTGTCA GTGAATCCAC CATTAAAACG
CATCTCTATC GTGCGTTTCG AAAAATTGGT GTGTCTAGTC GTGGTCAAGC CATTGCTTGG
GCGCAAACTC ATATGCATGA GGTGAGAGTG TGA
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| Protein sequence | MFKVENWMIV SRSQLLIDLL DSRWPQEFLV KLTKAQPGNM SKLLSTQTNS MVVFDLATID
LQQAYQLQRV IEREYCGIRT VFLNFPKQVD AKFLIHPSTT TGVFYTNANL ADVSSGLNEI
LKGRSVIPQD LYQSLMSVNH DDDSEQLTIR EREVLQTLLS GSTNLDIANQ LFVSESTIKT
HLYRAFRKIG VSSRGQAIAW AQTHMHEVRV
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