More than 300 homologs were found in PanDaTox collection
for query gene Sare_4229 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  100 
 
 
270 aa  517  1e-146  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  92.59 
 
 
268 aa  444  1e-123  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1088  transcriptional regulator, LuxR family  45.59 
 
 
207 aa  185  6e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  80.3 
 
 
198 aa  110  3e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  78.79 
 
 
198 aa  108  7.000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  82.26 
 
 
198 aa  106  3e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_013947  Snas_0377  transcriptional regulator, LuxR family  77.78 
 
 
134 aa  106  5e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2088  transcriptional regulator, LuxR family  77.42 
 
 
135 aa  105  1e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  52.1 
 
 
253 aa  103  3e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4745  two component transcriptional regulator, LuxR family  72.46 
 
 
209 aa  103  4e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5412  transcriptional regulator, LuxR family  64.71 
 
 
155 aa  103  4e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.207706  normal  0.221863 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  80.33 
 
 
203 aa  102  5e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_013947  Snas_5235  transcriptional regulator, LuxR family  75.81 
 
 
134 aa  102  9e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.183919  normal  0.452557 
 
 
-
 
NC_009664  Krad_0739  two component transcriptional regulator, LuxR family  81.97 
 
 
204 aa  101  1e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.297506  normal  0.226729 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  78.12 
 
 
199 aa  98.2  1e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_013947  Snas_0966  transcriptional regulator, LuxR family  74.19 
 
 
134 aa  97.8  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159258  normal 
 
 
-
 
NC_013947  Snas_4314  transcriptional regulator, LuxR family  70.49 
 
 
132 aa  90.5  2e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1473  transcriptional regulator, LuxR family  45.3 
 
 
203 aa  84.7  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.569189  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  62.3 
 
 
239 aa  77.8  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  54.05 
 
 
218 aa  76.3  0.0000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  58.06 
 
 
233 aa  75.9  0.0000000000007  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.45 
 
 
218 aa  75.5  0.0000000000009  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  58.06 
 
 
231 aa  73.9  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  33.18 
 
 
226 aa  73.9  0.000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  59.02 
 
 
213 aa  73.6  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  61.82 
 
 
236 aa  73.2  0.000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  56.34 
 
 
228 aa  72.4  0.000000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  28.19 
 
 
210 aa  72.4  0.000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.32 
 
 
229 aa  72.4  0.000000000008  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  57.38 
 
 
224 aa  72  0.000000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.84 
 
 
236 aa  71.6  0.00000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  55.74 
 
 
213 aa  71.6  0.00000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2342  response regulator receiver  46 
 
 
212 aa  71.2  0.00000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88989  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  52.46 
 
 
210 aa  70.9  0.00000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  63.64 
 
 
217 aa  70.5  0.00000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50 
 
 
229 aa  70.1  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  59.02 
 
 
221 aa  70.5  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50 
 
 
250 aa  70.1  0.00000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  57.38 
 
 
239 aa  70.1  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.46 
 
 
217 aa  70.1  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.227707 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  55.74 
 
 
250 aa  69.7  0.00000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  58.33 
 
 
214 aa  69.7  0.00000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  53.33 
 
 
210 aa  69.7  0.00000000005  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  46.24 
 
 
214 aa  69.3  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  58.33 
 
 
212 aa  69.3  0.00000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  49.44 
 
 
215 aa  69.3  0.00000000006  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  58.06 
 
 
226 aa  68.9  0.00000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013235  Namu_0487  two component transcriptional regulator, LuxR family  54.1 
 
 
215 aa  68.6  0.0000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  55.74 
 
 
230 aa  68.6  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  55.74 
 
 
224 aa  68.2  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  59.68 
 
 
231 aa  68.2  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  55.74 
 
 
218 aa  68.6  0.0000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  59.02 
 
 
215 aa  68.2  0.0000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  55.38 
 
 
235 aa  68.2  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.03 
 
 
239 aa  68.6  0.0000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  53.23 
 
 
225 aa  68.6  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  56.45 
 
 
228 aa  68.6  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013131  Caci_5428  two component transcriptional regulator, LuxR family  56.72 
 
 
201 aa  68.6  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.358603 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  48.39 
 
 
210 aa  67.4  0.0000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  55.74 
 
 
228 aa  67.8  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  53.33 
 
 
210 aa  67.8  0.0000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_008820  P9303_05591  DNA-binding response regulator  53.23 
 
 
241 aa  67.8  0.0000000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.843109 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.56 
 
 
225 aa  67.8  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_012669  Bcav_1820  two component transcriptional regulator, LuxR family  56.67 
 
 
216 aa  67.8  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.677493  normal  0.0923177 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  53.33 
 
 
210 aa  67.4  0.0000000002  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  55.74 
 
 
227 aa  67  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  50.72 
 
 
213 aa  67  0.0000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  45.59 
 
 
212 aa  67  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  42.67 
 
 
217 aa  67  0.0000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  54.55 
 
 
229 aa  67  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5878  two component transcriptional regulator, LuxR family  55.74 
 
 
441 aa  67.4  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.464013 
 
 
-
 
NC_009921  Franean1_0533  two component LuxR family transcriptional regulator  52.46 
 
 
219 aa  67  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  0.405575  normal 
 
 
-
 
NC_013889  TK90_1248  transcriptional regulator, LuxR family  42.62 
 
 
232 aa  66.6  0.0000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  49.18 
 
 
210 aa  66.6  0.0000000004  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  55.74 
 
 
234 aa  66.6  0.0000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  55.74 
 
 
221 aa  66.6  0.0000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  52.31 
 
 
222 aa  66.6  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  48.15 
 
 
253 aa  66.6  0.0000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.06 
 
 
230 aa  66.6  0.0000000004  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  49.18 
 
 
210 aa  66.6  0.0000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  53.97 
 
 
241 aa  66.6  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  56.67 
 
 
225 aa  66.6  0.0000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  52.46 
 
 
218 aa  66.6  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.08 
 
 
226 aa  66.2  0.0000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  54.1 
 
 
234 aa  66.2  0.0000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  52.24 
 
 
227 aa  66.2  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  45.57 
 
 
250 aa  66.2  0.0000000005  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013595  Sros_3519  response regulator receiver protein  50 
 
 
220 aa  66.2  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1053  two component transcriptional regulator, LuxR family  30.09 
 
 
236 aa  65.9  0.0000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.295708  normal  0.0294181 
 
 
-
 
NC_011729  PCC7424_0164  two component transcriptional regulator, LuxR family  37.23 
 
 
234 aa  65.9  0.0000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0441129 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  41.56 
 
 
222 aa  65.9  0.0000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1162  two component LuxR family transcriptional regulator  47.54 
 
 
225 aa  65.9  0.0000000007  Dehalococcoides sp. BAV1  Bacteria  normal  0.130665  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  54.84 
 
 
230 aa  65.5  0.0000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>