Gene Tpau_1989 details

Gene Information

• Locus tag: Tpau_1989
• ID: 9156144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2078574
• End bp: 2079263
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 69%
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003646940
• Protein GI: 296139697

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGATA CACGACCGTC GGAAGCCGAG GTCACGGTGG TGGTCGCCGA CGATCAGGCG 
ACCGTCCGCG ACGCGCTGGC CGCCATGCTC GACCTCAGCC CCGGCGTCAC CGTGGTGGGG 
ACAGCAGCGG ACGGCATCGA GGCGGTCGAT CTCGTCCTGT CCCTGCGGCC CGCCGTGCTC 
CTCACTGACC TGAGGATGCC GAACCTCGAC GGAGTCGGCG CGACCGAGCG GGTGGTCGCC 
GCTGCACCGG CAACGGCCGT CATCCTGCTC ACCACGTACG ACGACGAGGA GTCCATCCTC 
CGAGGGCTGC ACGCGGGCGC CCGCGGCTAC CTCACGAAGA ATGCGGGCAG AGCGGAGATC 
GCCGCCGCGA TCTCCGCCGC GGCGGCGGGG CAATCCGTGC TGGATCCCGC GGTGCAACAG 
CGACTGCTGG CCTCGATCAC CGCGACACCG GCGCCCGCCC AGGCTGCGGG CACACCTCCG 
GTCGACCTCA CACCGCGCGA GACCGAAGTA CTGCAGCTGA TCGCCGAAGG GCTGGCCAAC 
CGCGACATCG CCGCTCGCCT GTTCGTCAGC GAGTCCACCG TCAAGACCCA CATCAACAAT 
CTCTTCGCCA AGGCCCATCT GCGAGACCGC GCGCACGCGG TGCGATACGC CTTCGACACG 
GGCATCGCCG CATCACGTCA GGGCGATTGA 

 

Protein sequence

MTDTRPSEAE VTVVVADDQA TVRDALAAML DLSPGVTVVG TAADGIEAVD LVLSLRPAVL 
LTDLRMPNLD GVGATERVVA AAPATAVILL TTYDDEESIL RGLHAGARGY LTKNAGRAEI 
AAAISAAAAG QSVLDPAVQQ RLLASITATP APAQAAGTPP VDLTPRETEV LQLIAEGLAN 
RDIAARLFVS ESTVKTHINN LFAKAHLRDR AHAVRYAFDT GIAASRQGD