More than 300 homologs were found in PanDaTox collection
for query gene Snas_0966 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0966  transcriptional regulator, LuxR family  100 
 
 
134 aa  270  6e-72  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159258  normal 
 
 
-
 
NC_013947  Snas_5235  transcriptional regulator, LuxR family  82.71 
 
 
134 aa  223  6e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.183919  normal  0.452557 
 
 
-
 
NC_013947  Snas_0377  transcriptional regulator, LuxR family  80.45 
 
 
134 aa  214  4e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2088  transcriptional regulator, LuxR family  78.2 
 
 
135 aa  210  4.9999999999999996e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4314  transcriptional regulator, LuxR family  51.13 
 
 
132 aa  98.2  3e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3839  regulatory protein, LuxR  74.19 
 
 
268 aa  98.2  4e-20  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4229  two component LuxR family transcriptional regulator  74.19 
 
 
270 aa  97.8  5e-20  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.104641 
 
 
-
 
NC_013947  Snas_1088  transcriptional regulator, LuxR family  72.58 
 
 
207 aa  94.7  4e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5412  transcriptional regulator, LuxR family  47.33 
 
 
155 aa  92.8  1e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.207706  normal  0.221863 
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  58.44 
 
 
253 aa  92  2e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1210  two component transcriptional regulator, LuxR family  55.81 
 
 
198 aa  92.4  2e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  53.41 
 
 
198 aa  87  7e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.41 
 
 
198 aa  87  8e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  54.55 
 
 
203 aa  85.9  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_009664  Krad_0739  two component transcriptional regulator, LuxR family  62.9 
 
 
204 aa  85.9  2e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.297506  normal  0.226729 
 
 
-
 
NC_008578  Acel_0365  two component LuxR family transcriptional regulator  56.58 
 
 
199 aa  82.8  0.000000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.210231  normal  0.243335 
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  52.86 
 
 
223 aa  81.6  0.000000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal 
 
 
-
 
NC_013235  Namu_4745  two component transcriptional regulator, LuxR family  61.4 
 
 
209 aa  77  0.00000000000008  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1473  transcriptional regulator, LuxR family  61.29 
 
 
203 aa  75.9  0.0000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.569189  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48 
 
 
229 aa  72  0.000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  48 
 
 
224 aa  70.9  0.000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  49.28 
 
 
209 aa  69.3  0.00000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  50.79 
 
 
213 aa  68.2  0.00000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  52.46 
 
 
213 aa  68.2  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  42.86 
 
 
234 aa  67.8  0.00000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  47.06 
 
 
233 aa  66.6  0.0000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  50.82 
 
 
231 aa  66.2  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  50 
 
 
239 aa  66.6  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  50 
 
 
228 aa  66.6  0.0000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.75 
 
 
224 aa  66.6  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  50 
 
 
239 aa  66.6  0.0000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  47.31 
 
 
226 aa  66.2  0.0000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013521  Sked_32990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.14 
 
 
217 aa  66.2  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.227707 
 
 
-
 
NC_013235  Namu_0608  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  65.9  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  53.57 
 
 
236 aa  65.5  0.0000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.32 
 
 
227 aa  65.9  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013441  Gbro_2342  response regulator receiver  50.82 
 
 
212 aa  65.9  0.0000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88989  n/a   
 
 
-
 
NC_012669  Bcav_1820  two component transcriptional regulator, LuxR family  53.23 
 
 
216 aa  65.5  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.677493  normal  0.0923177 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.39 
 
 
218 aa  65.1  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  46.77 
 
 
218 aa  65.1  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0487  two component transcriptional regulator, LuxR family  53.23 
 
 
215 aa  65.1  0.0000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  45.07 
 
 
207 aa  65.1  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_008820  P9303_05591  DNA-binding response regulator  51.61 
 
 
241 aa  64.7  0.0000000004  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.843109 
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  52.31 
 
 
253 aa  64.3  0.0000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_38740  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  50.77 
 
 
250 aa  64.3  0.0000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  47.83 
 
 
212 aa  64.7  0.0000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2235  regulatory protein, LuxR  44.94 
 
 
231 aa  64.3  0.0000000006  Salinispora tropica CNB-440  Bacteria  normal  0.422182  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  49.28 
 
 
211 aa  63.9  0.0000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.66 
 
 
222 aa  63.9  0.0000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013739  Cwoe_4163  two component transcriptional regulator, LuxR family  44.83 
 
 
208 aa  63.9  0.0000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.296115  normal  0.698078 
 
 
-
 
NC_013739  Cwoe_0618  transcriptional regulator, LuxR family  43.27 
 
 
196 aa  63.5  0.0000000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2623  two component transcriptional regulator, LuxR family  46.15 
 
 
210 aa  63.5  0.000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.59 
 
 
236 aa  63.2  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_011729  PCC7424_5070  two component transcriptional regulator, LuxR family  46.84 
 
 
210 aa  63.2  0.000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.744929 
 
 
-
 
NC_013161  Cyan8802_3480  two component transcriptional regulator, LuxR family  46.15 
 
 
210 aa  63.5  0.000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.147525 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  50.82 
 
 
225 aa  63.5  0.000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.95 
 
 
226 aa  63.2  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  41.77 
 
 
236 aa  62.8  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.27 
 
 
218 aa  62.4  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  45.33 
 
 
215 aa  62.4  0.000000002  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  44 
 
 
292 aa  62.8  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.350857 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  46.15 
 
 
210 aa  62.8  0.000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  49.18 
 
 
234 aa  61.6  0.000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  46.88 
 
 
210 aa  62  0.000000003  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  48.39 
 
 
222 aa  62  0.000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  45.45 
 
 
227 aa  62  0.000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_009565  TBFG_10861  nitrate/nitrite response transcriptional regulatory protein narL  55.74 
 
 
216 aa  61.6  0.000000003  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000061441 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.59 
 
 
244 aa  61.6  0.000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  46.88 
 
 
210 aa  60.8  0.000000005  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  45.95 
 
 
224 aa  60.8  0.000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  46.88 
 
 
210 aa  60.8  0.000000005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  46.88 
 
 
210 aa  61.2  0.000000005  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  45.95 
 
 
226 aa  61.2  0.000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  45.33 
 
 
214 aa  60.8  0.000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  50 
 
 
207 aa  60.8  0.000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50 
 
 
228 aa  60.5  0.000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  43.84 
 
 
230 aa  60.5  0.000000007  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  50 
 
 
226 aa  60.5  0.000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.39 
 
 
239 aa  60.5  0.000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  42.65 
 
 
225 aa  60.5  0.000000008  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  46.03 
 
 
225 aa  60.5  0.000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.44 
 
 
229 aa  60.1  0.000000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  41.3 
 
 
220 aa  59.7  0.00000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3391  transcriptional regulator, LuxR family  50 
 
 
171 aa  60.1  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0382463  normal  0.946449 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  42.05 
 
 
225 aa  59.7  0.00000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  45 
 
 
212 aa  59.7  0.00000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  43.21 
 
 
209 aa  59.7  0.00000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1162  two component LuxR family transcriptional regulator  45.16 
 
 
225 aa  59.7  0.00000001  Dehalococcoides sp. BAV1  Bacteria  normal  0.130665  n/a   
 
 
-
 
NC_013510  Tcur_1253  two component transcriptional regulator, LuxR family  50.88 
 
 
203 aa  60.1  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  49.32 
 
 
225 aa  59.7  0.00000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  50.82 
 
 
215 aa  60.1  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  46.38 
 
 
211 aa  58.9  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013235  Namu_3546  two component transcriptional regulator, LuxR family  47.62 
 
 
229 aa  59.3  0.00000002  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00000843196  hitchhiker  0.00749158 
 
 
-
 
NC_013131  Caci_5878  two component transcriptional regulator, LuxR family  50.82 
 
 
441 aa  59.3  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.464013 
 
 
-
 
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