| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2235 |
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| Symbol | |
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| ID | 5058698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2528831 |
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| End bp | 2529526 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474497 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001159063 |
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| Protein GI | 145594766 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.422182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGT ACCGCGGCGA CCCCGACCCG CGGCGCCGGC CGATCCGCAT TCTGGTTGTC
GCCGGCCAAC CGCTGTTGCG CACCGGCTAC CGCACGGTAC TCGACGCCGA GGTCGACCTC
ACGGTCGTAG CCGAGGCCGC TACCGACGGC GAGGCAGTGG AGTTGGCTCG CCGGCTGCTG
CCCGACGTGG TGCTACTGGA CGCCCGCGCG CGCGGTGCCG GAGTGGCCAC GACACGGACG
ATCGTCGAGT CCGGGTTACC GGTACGGGTA CTGATCCTCG CCAGGGCCGA CCTCGAGGAG
AACGTGCTGG GGGCGCTCTG CGCCGGTGCG CGCGGCTTCC TTCCCCCAGA AGTGTCGTCC
ACGGAGCTGG CGGCTGCGAT CCGCTCGGTC GCCGCCGGGG ACGCGGTGGC GGCCCCCCGA
ATCCTCGATC GACTACTCAA CCAGCTCGCT GACCTGCTGC CCGACCCGGC GGCCACCCCG
TCGCGGCTAC TCGACTCGCT GACCGGGCGG GAGCGGGAGG TGCTGGTCCA GGTCGCCCGG
GGCCGGTCCA ACGCGGAGAT CGCCCAGGAG TTGTCGGTCA GCGAGACCAC GGTGAAGACG
CACGTCGGTA ACGTCCTGAC CAAACTCCGG CTCCGCGACC GGGTGCAGGC GGTGGTGCTG
GCGTACGAGT CCGGTCTGAT CCGGCCCCGG AGCTGA
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| Protein sequence | MSAYRGDPDP RRRPIRILVV AGQPLLRTGY RTVLDAEVDL TVVAEAATDG EAVELARRLL
PDVVLLDARA RGAGVATTRT IVESGLPVRV LILARADLEE NVLGALCAGA RGFLPPEVSS
TELAAAIRSV AAGDAVAAPR ILDRLLNQLA DLLPDPAATP SRLLDSLTGR EREVLVQVAR
GRSNAEIAQE LSVSETTVKT HVGNVLTKLR LRDRVQAVVL AYESGLIRPR S
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