Gene DhcVS_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1132 
Symbol 
ID8658061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand+ 
Start bp1043423 
End bp1044100 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content46% 
IMG OID 
ProductDNA-binding response regulator, LuxR family 
Protein accessionYP_003330574 
Protein GI270308516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.893152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACA ACAGCAAAAT CAGGGTAATG GTCATAGATG AGCAACCCTT TTTCAGAGCG 
GGTGTTGCCC AGGCCTTATC CGACAATAAT TTTGAGATAC TCCCAACCGA TACTCGCAAA 
GACCCCCTGG AACAGGTTGA AAGCAAAATG CCGGATGTAG TACTGCTGGG TTCAGACCTG 
ATAGCTTACA GCGGGCTTGA TTTGGGCAGA CGGATTGTGC GCACCTTTCC TAATACCAAG 
GTTATCATCC TTTCGCCAAA CCCCAATGAT ACCGAATTGT TCGAATGCAT CCGGACAGCA 
GCTGTGGCCT GTCTTAAGAA AAGCAGTACC GCAGAAGAGC TTGTTGAGAC TATCCGCCGG 
GCTAACCGGG GCGAATATCC TATTAATGAA AGCTTAATGA GCAGCCCCAA TCTTGCCAAA 
CAGGTACTGG CCCAGTTTCA AGATGTTTCC ATGCTGGGTA AGGATGCTTC CAATTTTGTT 
ACCCCTTTGA CCAACCGCGA AAAACAGATA TTAACCCTGA TTGCCAATGG CAATACCAAC 
AAACAGATTG CCAATAGTTT GGAAATAAGC GAACAAACCA TAAAAAACCA TGTCAGCGCT 
ATTTTACGCA AGTTAAACGC CAATGACAGG GCGCATGCGG TGGTTGTAGC TATACGCTGC 
GGCCTTATAA ATATTTAA
 
Protein sequence
MEDNSKIRVM VIDEQPFFRA GVAQALSDNN FEILPTDTRK DPLEQVESKM PDVVLLGSDL 
IAYSGLDLGR RIVRTFPNTK VIILSPNPND TELFECIRTA AVACLKKSST AEELVETIRR 
ANRGEYPINE SLMSSPNLAK QVLAQFQDVS MLGKDASNFV TPLTNREKQI LTLIANGNTN 
KQIANSLEIS EQTIKNHVSA ILRKLNANDR AHAVVVAIRC GLINI