Gene Cyan8802_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3480 
Symbol 
ID8392817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3550210 
End bp3550842 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content42% 
IMG OID644981413 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003139139 
Protein GI257061251 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.147525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTT TAATTGTTGA AGATGATCCC CTGATGCAAT TGGGATTAGA ACAAGCTTTG 
AGTGAATATC CTGACTTTGA GATCGTCGGA CAAGCGGAAG ATGGCTACGG GGGAATACAA
AAAGCCTTAG ACTTGAAGCC AGATCTCATC GTGATGGATA TTGGACTGCC TCGCTTAGAT
GGCATCGCTG CAACGAAACA AATTAAGGAA CAATTGCCAG ATATTCACAT CGTGATGTTG
ACTTCCCATA CCCTGCAAAC GGAGGTCGTT GCAGCATTAT CGAGTGGTGC CGATGCTTAT
TGTATCAAAG GGGCTAGTTT AGAGCGATTA TTAGCAGCCA TTGAAGCAGC TAAAGATGGG
GCAACCTATT TAGATCCCCA AATTGCCCGC TTAGTGTTAG ATAATTTAAA ACCACCAACC
CCAGAACCCA ATCAAAATCT TGCCCTACTT TCTGAACGAG AATTAGAGGT TTTAAAGTTA
ATTGTTGAAG GGAAAAGTAA TAATGAAATT GCTGAAGATT TGTATCTGAG TACCAATACG
ATTAAAACCC ATGTACGAGG AATTATGAAT AAATTAGCCG TGGATGATCG GGTACAAGCT
GCAGTTGTTG CCCTTCGTTC TGGATTAGTT TAA
 
Protein sequence
MRILIVEDDP LMQLGLEQAL SEYPDFEIVG QAEDGYGGIQ KALDLKPDLI VMDIGLPRLD 
GIAATKQIKE QLPDIHIVML TSHTLQTEVV AALSSGADAY CIKGASLERL LAAIEAAKDG
ATYLDPQIAR LVLDNLKPPT PEPNQNLALL SERELEVLKL IVEGKSNNEI AEDLYLSTNT
IKTHVRGIMN KLAVDDRVQA AVVALRSGLV