Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6980 |
Symbol | |
ID | 8338346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8077289 |
End bp | 8077930 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960060 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003117651 |
Protein GI | 256396087 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.999676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACG ACACGATCCG CGTCGTCCTG GCCGACGACC ACACGGTGAT GCGCGCCGGC GTCGTCGCCC TGCTGGCCTC CGAGCCCACC ATCACCATCG TCGGCGAGGC CGGCGACGGC CGGGAGGCGG TCGAGCTCGT CGAGCGCCTC GGCGCCGACG TGGCGCTGCT CGATCTGCGG ATGCCCGTCC TGGACGGCGT CGCGGCCACC ACCGAGATCG TCGCCGGCAA AACCGGAACC AGGGTCCTGA TCCTCACCAC TTATGACACC GACGCCGAGA TCGAGCGCGC GGTCGAGGCC GGCGCGATCG GCTATCTGCT CAAGGACACC ACCCGCGAGC AGCTCGTGGA GGCCATCCGC GGCGCGGCCC GCGGCGAGAC CGTCCTGGCG CCCCGGATCG CGGCCAAGCT TGTGGCGCGC ATGCGGCAAC CCGCCCCTGT CGTGCTGACC ACGCGGGAGG TCGACGTGCT CAACGGCGTC GCCGACGGCC TGTCCAACGC CGACATCGGC AAACGGCTGG TCATCGCCGA GGCGACGGTG AAGACCCACC TGCTCCGCGT CTTCGCCAAG CTCGACGTCA GCGACCGCAC GCACGCCGTC GTCACCGCCC TCGAACGAGG CCTGTTGCCC CGCTCCGAGT GA
|
Protein sequence | MTHDTIRVVL ADDHTVMRAG VVALLASEPT ITIVGEAGDG REAVELVERL GADVALLDLR MPVLDGVAAT TEIVAGKTGT RVLILTTYDT DAEIERAVEA GAIGYLLKDT TREQLVEAIR GAARGETVLA PRIAAKLVAR MRQPAPVVLT TREVDVLNGV ADGLSNADIG KRLVIAEATV KTHLLRVFAK LDVSDRTHAV VTALERGLLP RSE
|
| |