| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2457 |
|---|
| Symbol | |
|---|
| ID | 4182391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 2632774 |
|---|
| End bp | 2634438 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638068346 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_675006 |
|---|
| Protein GI | 110634798 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCT CGGATTCGAT GCCGCGTGGC AACCTCTATG GCAAACCGGA TCACATCGCT
CTGGGTCACC AGGCCTATGA GCGAAAGGCC TGGTATGACG CTTACCGAAG GCTGTCGCGC
GCGGGTGAGG CGGCGCCCCT CGACGTTGAA GACCTGGAGC GGCTGGCCGT GTCGGCTTAC
CTGGTCGGAC GCGACGAGGA TTACCTACGG GTTTTGGAGC GGGTCCATCA CGCCCATCTC
GACAGCGGCA ATCTGATCCG TGCCGCGCGC GCAGCCTTCT GGGTGGGGCT GCGCCTGGCC
CTGCGTGGCG AGGCCGGTCC GGCGAGCGGG TGGTTCGGCC GTGCCCATCG GCTGCTCGAA
CGCGAAGGCA AGTCCTGCGT CGAGGAAGGG TATCTCTTGC TGCCGCTCGC GGAGCAGCAA
CTCGGTGCCA AAGCCGCTGA CACCGCCCTC GGCACGGCGA CCCGCGCTGC CGAGATCGCG
GAGAAATTTG GGGAAGCCGA TCTAGGAGCC TGCGCCCGTC ATATGCAGGG CCGGATACTT
ATCCAGCAGG GTGAGGTGGA AAAGGGGCTC GCTCTGCTGG ACGAAGCGAT GGTGGCGGTC
ACTGCCGGAG AACTGTCGCC GATTATGACG GGCCTGATCT ATTGCAGCGT CATCGATGCC
TGTCAGCAGA TTTATGCCGT GGATCGTGCG CGCCAATGGA CGAACGCCCT GGCGCAGTGG
TGCGCGGAGC AGCCGCAGCT TGTGAGCTTT ACCGGCAGCT GCCTGGTTCA TCGTGCCGAG
ATCATGCAGA TGAACGGTTT TTGGCCCCAG GCGATAGAGG AAGCTCGCCG CGCATGCGCC
GTTACGCGGG GGTCGGAACT GCCGCCACCG GGAACTGCCT ATTATCAGCA GGCGGAAATT
CACCGCCTGC GCGGCGAATT CGCGGAGGCC GAGAAGGCGT TCCGGCAGGC CAGCAGTCGC
GGCTGTGAGC CGCTGCCCGG CCTTGCTTTG CTGCGGCTTG CCCAAAAGCG AACCGAAGCT
GCGGCTGCGG CAATCAAGCG GGCCCTTGGA GCGACGGAGG ATCGGCTGCT GCGCGCCAAG
TTTCTACCGG CCTGCGTGGA GATCATGCTT GCAAGCGGCG ATATTGCCTC GGCCGGCGAG
GCATGCCGGG AGTTGGAGGA AAGCGCCGAT CGTTTCCGGA CTGTTGTCCT GCAGGCGATG
GCCGGCCATG CGGCCGGTGC CGTCGCCTTG TCTGCCGATG ATCACCAAAA CGCGTTGAAA
GCCCTCAGGG CCGCATTTGA GCTTTGGCTC CAGGTCGAGG CGCCCTATCC TGCCGCGCGC
ACGCGGGAGC TCATGGCATT GGCGTGCCGC GGCATGGGCG ACGAGGAGGG CGCGAGCCTG
GAACTCGCTG CGGCCCGCGA AGCGTTCCAG GCGTTGGGCG CTGCGCCGGA TATGGCCAGG
ATCGATCGCT TGGCGCTTCC GCGCAACACG CGCAAGGGAC TGACCCGGCG CGAACTTGAG
GTGCTGCGGT TGGTTACGGC TGGCAAGCCG AACAAGGTGA TCGCGGCCGA GTTGTTTCTA
AGTGAGAAGA CGATCGACCG GCATCTTAGC AACATCTTCG ACAAGCTTGG TGTCTCCTCG
CGAACGGCCG CTGCCGCCTG GGCGTTCCGC CAAGGGCTCG TTTGA
|
|---|
| Protein sequence | MESSDSMPRG NLYGKPDHIA LGHQAYERKA WYDAYRRLSR AGEAAPLDVE DLERLAVSAY
LVGRDEDYLR VLERVHHAHL DSGNLIRAAR AAFWVGLRLA LRGEAGPASG WFGRAHRLLE
REGKSCVEEG YLLLPLAEQQ LGAKAADTAL GTATRAAEIA EKFGEADLGA CARHMQGRIL
IQQGEVEKGL ALLDEAMVAV TAGELSPIMT GLIYCSVIDA CQQIYAVDRA RQWTNALAQW
CAEQPQLVSF TGSCLVHRAE IMQMNGFWPQ AIEEARRACA VTRGSELPPP GTAYYQQAEI
HRLRGEFAEA EKAFRQASSR GCEPLPGLAL LRLAQKRTEA AAAAIKRALG ATEDRLLRAK
FLPACVEIML ASGDIASAGE ACRELEESAD RFRTVVLQAM AGHAAGAVAL SADDHQNALK
ALRAAFELWL QVEAPYPAAR TRELMALACR GMGDEEGASL ELAAAREAFQ ALGAAPDMAR
IDRLALPRNT RKGLTRRELE VLRLVTAGKP NKVIAAELFL SEKTIDRHLS NIFDKLGVSS
RTAAAAWAFR QGLV
|
|---|
| |