Gene LACR_0967 details

Gene Information

• Locus tag: LACR_0967
• ID: 4433775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 909367
• End bp: 909996
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 639666724
• Product: DNA-binding response regulator
• Protein accession: YP_808935
• Protein GI: 116511719
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.598364
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA TCAAACTTTT AATTGTAGAT GACCACCAGA TGGTGCGCCT TGGTTTATCA 
AGTTTTATGA ATATCCAACC CGATATTGAA GTGGTTGGTG AAGCTGCCGA TGGGGAGTCA 
GGTTTTTTAA AAACAGAAAT GCTTGACCCA GACGTTATAT TGATGGATTT GGTAATGGAT 
AGACTTGACG GTATTGGGGC AACTCAGAAA ATTTTAGCCA AAAATCCTGA AAGAAAAATT 
TTGATTTTGA CAAGTTTTAT TGATGATGAA AAAGTTTTTC CAGCTCTGGC TGCAGGAGCA 
AAAGGATATA TTCTTAAAAC TTCACAAGCC GCAGAAATTG CAATGGCAAT CAGAAAAGTT 
GCCAATGGCG AAGACGTTTT GTCTGACGCG GTCAAAGAAA AAATTGCCCA ACAAAAGCAT 
CGCAAGCATG AACTCTATGA TGACTTATCT AAAAGAGAAT TAGAAGTACT AAAAGTTCTT 
GCTACAGGAC TTTCCAATCA AGAAATTGCT GACGAACTTT TTATCAGCTT AAAAACAGTA 
AAAACACATG TTTCAAATAT ATTCAATAAA CTTGAAGTTT CGGACCGCAC TCAGGCTACT 
ATTTATGCCA TTCAACATCA TTTAGTATAA 

 

Protein sequence

MEKIKLLIVD DHQMVRLGLS SFMNIQPDIE VVGEAADGES GFLKTEMLDP DVILMDLVMD 
RLDGIGATQK ILAKNPERKI LILTSFIDDE KVFPALAAGA KGYILKTSQA AEIAMAIRKV 
ANGEDVLSDA VKEKIAQQKH RKHELYDDLS KRELEVLKVL ATGLSNQEIA DELFISLKTV 
KTHVSNIFNK LEVSDRTQAT IYAIQHHLV